How to fix R on centos8 - r

Today, i want open R on linux:
$R
bash: R: command not found...
and then I remember I installed R using dnf:
$dnf list|grep R-core
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
R-core.x86_64 4.1.3-1.el8 tuna
R-core-devel.x86_64 4.1.3-1.el8 tuna
It looks like I installed R, so I'm trying to find the location of R:
$which R
/usr/bin/which: no R in (/home/data/sym/software/metawrap/bin/:/home/data/sym/software/ncbi-blast-2.12.0+/bin/:/usr/bin:/home/data/sym/software/FastQC:/usr/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/root/software:/home/data/sym//.aspera/connect/bin/)
I think I may have accidentally deleted some files of R, which made R unable to run, so I tried to reinstall R, and met error, I tried to solve error, and met more error:
$dnf install R
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
Last metadata expiration check: 1:59:20 ago on Wed 17 Aug 2022 04:09:30 PM CST.
Error:
Problem: package R-4.1.3-1.el8.x86_64 requires R-devel = 4.1.3-1.el8, but none of the providers can be installed
- package R-devel-4.1.3-1.el8.x86_64 requires R-core-devel = 4.1.3-1.el8, but none of the providers can be installed
- conflicting requests
- nothing provides openblas-devel needed by R-core-devel-4.1.3-1.el8.x86_64
- nothing provides tcl-devel needed by R-core-devel-4.1.3-1.el8.x86_64
- nothing provides texinfo-tex needed by R-core-devel-4.1.3-1.el8.x86_64
(try to add '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)
$ dnf install R --skip-broken
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
Last metadata expiration check: 2:04:58 ago on Wed 17 Aug 2022 04:09:30 PM CST.
Dependencies resolved.
Nothing to do.
Complete!
$dnf install -y epel-release
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
Last metadata expiration check: 2:02:01 ago on Wed 17 Aug 2022 04:09:30 PM CST.
Package epel-release-8-16.el8.noarch is already installed.
Dependencies resolved.
Nothing to do.
Complete!
$ dnf install openblas-devel
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
Last metadata expiration check: 2:01:16 ago on Wed 17 Aug 2022 04:09:30 PM CST.
No match for argument: openblas-devel
Error: Unable to find a match: openblas-devel
$ dnf config-manager --set-enabled PowerTools
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
Error: No matching repo to modify: PowerTools.
$ dnf grouplist
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
Last metadata expiration check: 2:06:29 ago on Wed 17 Aug 2022 04:09:30 PM CST.
Available Environment Groups:
Server
Workstation
KDE Plasma Workspaces
Virtualization Host
Installed Environment Groups:
Server with GUI
Installed Groups:
Container Management
Development Tools
Headless Management
Available Groups:
Fedora Packager
Xfce
.NET Core Development
Graphical Administration Tools
Network Servers
RPM Development Tools
Scientific Support
Security Tools
Smart Card Support
System Tools
$ dnf repolist
Repository libnvidia-container is listed more than once in the configuration
Repository libnvidia-container-experimental is listed more than once in the configuration
repo id repo name
1 1
2 2
3 3
4 4
5 5
docker docker
elrepo ELRepo.org Community Enterprise Linux Repository - el8
libnvidia-container libnvidia-container
libnvidia-container-experimental libnvidia-container-experimental
mo mo
nvidia-container-runtime nvidia-container-runtime
tuna tuna
And i tried to install all the missing dependencies:
$dnf install openblas
Last metadata expiration check: 3:21:34 ago on Wed 17 Aug 2022 04:09:30 PM CST.
Error:
Problem: cannot install the best candidate for the job
- nothing provides libgfortran.so.5()(64bit) needed by openblas-0.3.15-3.el8.x86_64
- nothing provides libgfortran.so.5(GFORTRAN_8)(64bit) needed by openblas-0.3.15-3.el8.x86_64
(try to add '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)
$dnf search libgfortran
Last metadata expiration check: 3:25:22 ago on Wed 17 Aug 2022 04:09:30 PM CST.
============================================================ Name Matched: libgfortran ========================================
compat-libgfortran-48.i686 : Compatibility Fortran runtime library version 4.8.5
compat-libgfortran-48.x86_64 : Compatibility Fortran runtime library version 4.8.5
$dnf install compat-libgfortran-48.x86_64
Last metadata expiration check: 3:26:34 ago on Wed 17 Aug 2022 04:09:30 PM CST.
Error:
Problem: conflicting requests
- nothing provides libquadmath.so.0()(64bit) needed by compat-libgfortran-48-4.8.5-36.1.el8.x86_64
- nothing provides libquadmath.so.0(QUADMATH_1.0)(64bit) needed by compat-libgfortran-48-4.8.5-36.1.el8.x86_64
(try to add '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)
$dnf search libquadmath
Last metadata expiration check: 3:29:24 ago on Wed 17 Aug 2022 04:09:30 PM CST.
============================================================ Name Matched: libquadmath ========================================
gcc-toolset-10-libquadmath-devel.i686 : GCC 10 __float128 support
gcc-toolset-10-libquadmath-devel.x86_64 : GCC 10 __float128 support
gcc-toolset-11-libquadmath-devel.i686 : GCC 11 __float128 support
gcc-toolset-11-libquadmath-devel.x86_64 : GCC 11 __float128 support
gcc-toolset-9-libquadmath-devel.i686 : GCC 9 __float128 support
gcc-toolset-9-libquadmath-devel.x86_64 : GCC 9 __float128 support
libquadmath-devel.i686 : GCC __float128 support
libquadmath-devel.x86_64 : GCC __float128 support
So, what exactly is the problem?

Related

Setting up Apache Atlas

I am trying to setup Apache Atlas on my Windows 10 machine. I have the following prereqs:
Maven Version 3.8.6
JDK Version 1.8.0
Python 2.7.7
I then pull Apache Atlas and I am using tags/release-2.3.0. Once downloaded, I run the following commands in Powershell:
set MAVEN_OPTS="-Xms2g -Xmx2g
mvn clean install
This starts running a set of tests, which fail. I get the following error:
in org.apache.atlas.kafka.KafkaNotificationTest [ERROR]
org.apache.atlas.kafka.KafkaNotificationTest.testReceiveKafkaMessages
Time elapsed: 8.178 s <<< FAILURE! java.lang.NoClassDefFoundError:
org/apache/atlas/kafka/AtlasKafkaMessage
at org.apache.atlas.kafka.KafkaNotificationTest.testReceiveKafkaMessages(KafkaNotificationTest.java:63)
Caused by: java.lang.ClassNotFoundException:
org.apache.atlas.kafka.AtlasKafkaMessage
at org.apache.atlas.kafka.KafkaNotificationTest.testReceiveKafkaMessages(KafkaNotificationTest.java:63)
How can I resolve this issue to install Atlas?

Missing binary when run command 'conan create', the auto finding package_id is not the one existed on remote artifactory

Problem/Questions:
I run conan create, but encountered an error.
it shows that it can't find the required package with the package_id 9a528cba5863064039249f6fd79f1ba70071cfb6 under version 0.1.3,
but the package_id of the package under version 0.1.3 existed on remote artifactory is 48a2fe710ac47cd442376b3b7175a956b16574c4,not 9a528cba5863064039249f6fd79f1ba70071cfb6, 9a528cba5863064039249f6fd79f1ba70071cfb6 is not existed under any version on remote or local.
why conan always find the not existed 9a528cba5863064039249f6fd79f1ba70071cfb6?
and how to resolve it to find the existed 48a2fe710ac47cd442376b3b7175a956b16574c4?
Reproduce steps:
I set 'xxxx_app/0.1.3#xx1.3.0/stable' as requirements in conanfile.py
and run below command and got above error:
$ mkdir build && cd build
$ conan create .. xx1.3.0/stable -r xxx-conan-local --profile=orin -s build_type=Release
Error log:
ERROR: Missing binary: xxxx_app/0.1.3#xx1.3.0/stable:9a528cba5863064039249f6fd79f1ba70071cfb6
xxxx_app/0.1.3#xx1.3.0/stable: WARN: Can't find a 'xxxx_app/0.1.3#xx1.3.0/stable' package for the specified settings, options and dependencies:
Settings: arch=armv8, build_type=Release, compiler=gcc, compiler.libcxx=libstdc++11, compiler.version=9.3, os=Linux, platform=orin
Package ID: 9a528cba5863064039249f6fd79f1ba70071cfb6

xdebug : Fatal error with phpunit for code coverage

I wanna to test my code and coverage. I already install Xdebug extension and when I verify with php -v command, all i'ts good like that :
PHP 7.4.12 (cli) (built: Oct 27 2020 17:18:47) ( ZTS Visual C++ 2017 x64 )
Copyright (c) The PHP Group
Zend Engine v3.4.0, Copyright (c) Zend Technologies
with Xdebug v3.0.0RC1, Copyright (c) 2002-2020, by Derick Rethans
with Zend OPcache v7.4.12, Copyright (c), by Zend Technologies
However if I run phpunit i have a fatal error :
PHPUnit 7.5.20 by Sebastian Bergmann and contributors.
Fatal error: Uncaught SebastianBergmann\CodeCoverage\RuntimeException: xdebug.coverage_enable=On has to be set in php.ini in C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\.phpunit\phpunit-7.5-0\vendor\phpunit\php-code-coverage\src\Driver\Xdebug.php on line 42
SebastianBergmann\CodeCoverage\RuntimeException: xdebug.coverage_enable=On has to be set in php.ini in C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\.phpunit\phpunit-7.5-0\vendor\phpunit\php-code-coverage\src\Driver\Xdebug.php on line 42
Call Stack:
0.0005 402112 1. {main}() C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\phpunit:0
0.0027 477240 2. require('C:\Users\quent\Desktop\Github\quentingeeraert-website\vendor\symfony\phpunit-bridge\bin\simple-phpunit.php') C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\phpunit:13
0.2824 501760 3. include('C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\.phpunit\phpunit-7.5-0\phpunit') C:\Users\quent\Desktop\Github\quentingeeraert-website\vendor\symfony\phpunit-bridge\bin\simple-phpunit.php:405
0.2989 1149952 4. PHPUnit\TextUI\Command::main($exit = ???) C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\.phpunit\phpunit-7.5-0\phpunit:22
0.2989 1150064 5. Symfony\Bridge\PhpUnit\Legacy\CommandForV6->run($argv = [0 => 'bin\\phpunit', 1 => '--colors=always', 2 => '--stop-on-failure'], $exit = TRUE) C:\Users\quent\Desktop\Github\quentingeeraert-website\bin\.phpunit\phpunit-7.5-0\src\TextUI\Command.php:162
I already add xdebug.coverage_enable = On in my php.ini file so I don't understand why the system say that :/
Maybe someone can help me ? Thank you a lot for help me !
I already add xdebug.coverage_enable = On in my php.ini file so I don't understand why the system say that :/
Xdebug v3.0.0RC1
PHPUnit 7.5.20
Either upgrade PHPUnit to the version that knows about Xdebug 3 ... or downgrade Xdebug to 2.x (2.9.8 is the latest).
Thing is: xdebug.coverage_enable is the Xdebug 2 option. That option does nothing in Xdebug 3 where you should use xdebug.mode = coverage instead.
Xdebug 3 uses different config options than v2 and your version of PHPUnit is simply not aware of that. Xdebug 3 will simply report an empty value/0 for no-longer-used Xdebug 2 options.
https://3.xdebug.org/docs/upgrade_guide#Changed-Configuration-Settings
P.S. You should see a warning when you run php -i with Xdebug 3 -- it should complain if such a wrong/outdated option is present in your php.ini (unless you have configured PHP to not to report any startup errors I guess).
In either case: run php -i and see the actual live values from Xdebug section: what value that option has.

Azure Devops - dotnetcore build fails consistently - process failed to start

Am setting up a small project build, which is in .Net Core. dotnet build fails everytime with below log:
2019-10-03T21:31:54.5434435Z ##[section]Starting: dotnet build
2019-10-03T21:31:54.5559431Z ==============================================================================
2019-10-03T21:31:54.5559511Z Task : .NET Core
2019-10-03T21:31:54.5559544Z Description : Build, test, package, or publish a dotnet application, or run a custom dotnet command
2019-10-03T21:31:54.5559595Z Version : 2.158.0
2019-10-03T21:31:54.5559626Z Author : Microsoft Corporation
2019-10-03T21:31:54.5559679Z Help : https://learn.microsoft.com/azure/devops/pipelines/tasks/build/dotnet-core-cli
2019-10-03T21:31:54.5559712Z ==============================================================================
2019-10-03T21:31:55.3428758Z [command]C:\windows\system32\chcp.com 65001
2019-10-03T21:31:55.3566253Z Active code page: 65001
2019-10-03T21:31:55.5334629Z [command]C:\hostedtoolcache\windows\dotnet\dotnet.exe build d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool.csproj --no-restore
2019-10-03T21:31:55.5534100Z ##[error]Error: There was an error when attempting to execute the process 'C:\hostedtoolcache\windows\dotnet\dotnet.exe'. This may indicate the process failed to start. Error: spawn C:\hostedtoolcache\windows\dotnet\dotnet.exe ENOENT
2019-10-03T21:31:55.5546833Z ##[error]Dotnet command failed with non-zero exit code on the following projects : d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool.csproj
2019-10-03T21:31:55.5625878Z ##[section]Finishing: dotnet build
I have now added a dotnet SDK activity to load 2.2.x version and then then an explicit dotnet restore step (even though its not needed technically as build should do a restore too). But, the restore step passes, but it fails every time in the build step.
Some partial logs from the restore process are shown below -
2019-10-03T21:30:25.5826687Z ##[section]Starting: dotnet restore
2019-10-03T21:30:25.5942577Z ==============================================================================
2019-10-03T21:30:25.5942669Z Task : .NET Core
2019-10-03T21:30:25.5942702Z Description : Build, test, package, or publish a dotnet application, or run a custom dotnet command
2019-10-03T21:30:25.5942756Z Version : 2.158.0
2019-10-03T21:30:25.5942787Z Author : Microsoft Corporation
2019-10-03T21:30:25.5942837Z Help : https://learn.microsoft.com/azure/devops/pipelines/tasks/build/dotnet-core-cli
2019-10-03T21:30:25.5942869Z ==============================================================================
2019-10-03T21:30:27.1500592Z [command]C:\windows\system32\chcp.com 65001
2019-10-03T21:30:27.7292436Z Active code page: 65001
2019-10-03T21:30:27.7296084Z SYSTEMVSSCONNECTION exists true
2019-10-03T21:30:28.0692275Z SYSTEMVSSCONNECTION exists true
2019-10-03T21:30:28.5211540Z SYSTEMVSSCONNECTION exists true
2019-10-03T21:30:28.5240738Z Saving NuGet.config to a temporary config file.
2019-10-03T21:30:28.5284543Z Saving NuGet.config to a temporary config file.
2019-10-03T21:30:28.5338058Z [command]C:\hostedtoolcache\windows\dotnet\dotnet.exe restore d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool.csproj --configfile d:\a\_temp\Nuget\tempNuGet_05ce1f4cc83beb812b37be120d7010969ab1a363.config --verbosity Detailed
2019-10-03T21:30:31.1552382Z
2019-10-03T21:30:31.1633338Z Welcome to .NET Core!
2019-10-03T21:30:31.1633445Z ---------------------
2019-10-03T21:30:31.1633487Z Learn more about .NET Core: https://aka.ms/dotnet-docs
2019-10-03T21:30:31.1633556Z Use 'dotnet --help' to see available commands or visit: https://aka.ms/dotnet-cli-docs
2019-10-03T21:30:31.1633582Z
2019-10-03T21:30:31.1633618Z Telemetry
2019-10-03T21:30:31.1633654Z ---------
2019-10-03T21:30:31.1633712Z The .NET Core tools collect usage data in order to help us improve your experience. The data is anonymous and doesn't include command-line arguments. The data is collected by Microsoft and shared with the community. You can opt-out of telemetry by setting the DOTNET_CLI_TELEMETRY_OPTOUT environment variable to '1' or 'true' using your favorite shell.
2019-10-03T21:30:31.1633881Z
2019-10-03T21:30:31.1633924Z Read more about .NET Core CLI Tools telemetry: https://aka.ms/dotnet-cli-telemetry
2019-10-03T21:30:31.1684350Z
2019-10-03T21:30:31.1686360Z Configuring...
2019-10-03T21:30:31.1686911Z --------------
2019-10-03T21:30:31.1687446Z A command is running to populate your local package cache to improve restore speed and enable offline access. This command takes up to one minute to complete and only runs once.
2019-10-03T21:30:44.4629886Z Decompressing .......... 13256 ms
2019-10-03T21:31:36.6357349Z Expanding .......... 51984 ms
2019-10-03T21:31:38.0761886Z
2019-10-03T21:31:38.0762691Z ASP.NET Core
2019-10-03T21:31:38.0762874Z ------------
2019-10-03T21:31:38.0763054Z Successfully installed the ASP.NET Core HTTPS Development Certificate.
2019-10-03T21:31:38.0763284Z To trust the certificate run 'dotnet dev-certs https --trust' (Windows and macOS only). For establishing trust on other platforms refer to the platform specific documentation.
2019-10-03T21:31:38.0763446Z For more information on configuring HTTPS see https://go.microsoft.com/fwlink/?linkid=848054.
2019-10-03T21:31:38.4176357Z Build started 10/3/2019 9:31:38 PM.
2019-10-03T21:31:38.9605866Z 0>Resolving SDK 'Microsoft.NET.Sdk'...
2019-10-03T21:31:38.9816247Z Property reassignment: $(MSBuildProjectExtensionsPath)="d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\obj\" (previous value: "obj\") at C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Current\Microsoft.Common.props (56,5)
2019-10-03T21:31:38.9833374Z Property reassignment: $(MSBuildAllProjects)=";C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\Sdk\Sdk.props;C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\targets\Microsoft.NET.Sdk.props" (previous value: ";C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\Sdk\Sdk.props") at C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\targets\Microsoft.NET.Sdk.props (15,5)
2019-10-03T21:31:38.9949011Z Property reassignment: $(MSBuildAllProjects)=";C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\Sdk\Sdk.props;C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\targets\Microsoft.NET.Sdk.props;C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\targets\Microsoft.NET.Sdk.DefaultItems.props" (previous value: ";C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\Sdk\Sdk.props;C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\targets\Microsoft.NET.Sdk.props") at C:\hostedtoolcache\windows\dotnet\sdk\2.2.402\Sdks\Microsoft.NET.Sdk\targets\Microsoft.NET.Sdk.DefaultItems.props (21,5)
...
...
...
2019-10-03T21:31:47.9997847Z Generating MSBuild file d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\GDPR.OutputProvider\obj\GDPR.OutputProvider.csproj.nuget.g.props.
2019-10-03T21:31:47.9998017Z Generating MSBuild file d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\GDPR.OutputProvider\obj\GDPR.OutputProvider.csproj.nuget.g.targets.
2019-10-03T21:31:48.0229473Z Writing assets file to disk. Path: d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\GDPR.OutputProvider\obj\project.assets.json
2019-10-03T21:31:48.0229714Z Checking compatibility of packages on .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0229774Z Checking compatibility for GDPR.Output.IO 1.0.0 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0229817Z Checking compatibility for NETStandard.Library 2.0.3 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0229859Z Checking compatibility for GDPR.Common 1.0.0 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0229916Z Checking compatibility for GDPR.Logger 1.0.0 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0229955Z Checking compatibility for GDPR.ObjectModel 1.0.0 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0229996Z Checking compatibility for WindowsAzure.Storage 9.3.3 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230054Z Checking compatibility for Microsoft.NETCore.Platforms 1.1.0 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230299Z Checking compatibility for Microsoft.Azure.KeyVault 3.0.3 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230341Z Checking compatibility for Microsoft.Azure.Management.KeyVault 2.4.3 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230394Z Checking compatibility for Microsoft.Azure.Services.AppAuthentication 1.0.3 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230457Z Checking compatibility for Microsoft.IdentityModel.Clients.ActiveDirectory 5.0.5 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230500Z Checking compatibility for Microsoft.Rest.ClientRuntime.Azure.Authentication 2.4.0 with .NETStandard,Version=v2.0.
2019-10-03T21:31:48.0230543Z Checking compatibility for System.Security.Cryptography.X509Certificates 4.3.2 with .NETStandard,Version=v2.0.
...
...
...
2019-10-03T21:31:54.4289388Z All packages and projects are compatible with .NETCoreApp,Version=v2.1.
2019-10-03T21:31:54.4454996Z Committing restore...
2019-10-03T21:31:54.4459080Z Generating MSBuild file d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\obj\MyTool.csproj.nuget.g.props.
2019-10-03T21:31:54.4460039Z Generating MSBuild file d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\obj\MyTool.csproj.nuget.g.targets.
2019-10-03T21:31:54.4461496Z Writing assets file to disk. Path: d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\obj\project.assets.json
2019-10-03T21:31:54.4567260Z Writing cache file to disk. Path: d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\obj\MyTool.csproj.nuget.cache
2019-10-03T21:31:54.4573630Z Restore completed in 4.12 sec for d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool.csproj.
2019-10-03T21:31:54.4661557Z
2019-10-03T21:31:54.4662703Z NuGet Config files used:
2019-10-03T21:31:54.4663349Z d:\a\_temp\Nuget\tempNuGet_05ce1f4cc83beb812b37be120d7010969ab1a363.config
2019-10-03T21:31:54.4664039Z
2019-10-03T21:31:54.4664744Z Feeds used:
2019-10-03T21:31:54.4665067Z https://api.nuget.org/v3/index.json
2019-10-03T21:31:54.4785886Z
2019-10-03T21:31:54.4786633Z Installed:
2019-10-03T21:31:54.4796944Z 7 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.Logger\MyTool.Logger.csproj
2019-10-03T21:31:54.4803020Z 32 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.Common\MyTool.Common.csproj
2019-10-03T21:31:54.4803472Z 33 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.OutputProvider\MyTool.OutputProvider.csproj
2019-10-03T21:31:54.4803792Z 34 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.Output.IO\MyTool.Output.IO.csproj
2019-10-03T21:31:54.4804056Z 33 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.SearchFilter\MyTool.SearchFilter.csproj
2019-10-03T21:31:54.4804362Z 32 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.PiiData\MyTool.PiiData.csproj
2019-10-03T21:31:54.4805159Z 42 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool\MyTool.SearchHandler\MyTool.SearchHandler.csproj
2019-10-03T21:31:54.4805573Z 42 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool.App\MyTool.App.csproj
2019-10-03T21:31:54.4805849Z 46 package(s) to d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool.csproj
2019-10-03T21:31:54.4806121Z Done executing task "RestoreTask".
2019-10-03T21:31:54.4806389Z 1>Done building target "Restore" in project "MyTool.csproj".
2019-10-03T21:31:54.4806658Z 1>Done Building Project "d:\a\r1\a\MyTool\DataFactory\CustomActivities\MyTool\MyTool.csproj" (Restore target(s)).
2019-10-03T21:31:54.5031887Z
2019-10-03T21:31:54.5032209Z Build succeeded.
2019-10-03T21:31:54.5032251Z 0 Warning(s)
2019-10-03T21:31:54.5032319Z 0 Error(s)
2019-10-03T21:31:54.5032343Z
2019-10-03T21:31:54.5032377Z Time Elapsed 00:00:16.08
2019-10-03T21:31:54.5417968Z ##[section]Finishing: dotnet restore
Any clues what could be going wrong?
This was happening because I had something in the 'Working Directory'. I just cleared the "Working directory" field. Before I had set it to the subfolder containing the .csproj file which was incorrect. The working directory should be the root.

Install error with Aptana Studio 3 on CentOS 5 (glibc version)

On a CentOS 5 server, I have downloaded and unzipped Aptana Studio 3. When I run it, the IDE opens properly but generates an error and ask to close.
The error is the following:
!SESSION 2011-10-13 16:25:43.255 -----------------------------------------------
eclipse.buildId=unknown
java.version=1.6.0_25
java.vendor=Sun Microsystems Inc.
BootLoader constants: OS=linux, ARCH=x86, WS=gtk, NL=en_US
Command-line arguments: -os linux -ws gtk -arch x86
!ENTRY org.eclipse.ui 4 4 2011-10-13 16:25:46.561
!MESSAGE Unable to find Action Set: com.aptana.editor.php.presentation
!ENTRY org.eclipse.ui 4 4 2011-10-13 16:26:19.394
!MESSAGE An internal error has occurred.
!STACK 0
org.eclipse.swt.SWTError: No more handlesNative code library failed to load. (java.lang.UnsatisfiedLinkError: /usr/local/Aptana_Studio_3/plugins/com.aptana.swt.webkitbrowser.linux.x86_1.0.0.1295409059/os/linux/x86/libcefjni.so: /lib/libc.so.6: version `GLIBC_2.7' not found (required by /usr/local/Aptana_Studio_3/plugins/com.aptana.swt.webkitbrowser.linux.x86_1.0.0.1295409059/os/linux/x86/libcefjni.so))
and here is the answer to rpm -qi glibc:
Name : glibc Relocations: (not relocatable)
Version : 2.5 Vendor: CentOS
Release : 65 Build Date: Fri 12 Aug 2011 01:49:31 PM EDT
Install Date: Wed 14 Sep 2011 01:31:47 AM EDT Build Host: builder10.centos.org
Group : System Environment/Libraries Source RPM: glibc-2.5-65.src.rpm
Size : 12971036 License: LGPL
Signature : DSA/SHA1, Fri 12 Aug 2011 05:24:55 PM EDT, Key ID a8a447dce8562897
Summary : The GNU libc libraries.
Any way to work around that?
Thanks.
I just removed that plugin (com.aptana.swt.webkitbrowser.linux.x86_1.0.0.1295409059) from the plugins directory. The aptana studio startup web page doesn't work, but I haven't had a problem with regular editing yet.

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