Graphing Values from multiple H5/HDF5 files at once - r

Question

I've first figured out how to read and name multiple H5 files from my directory, but I'm running into actually being able to graph with them. My problem is multiple - with this type of file, I do not know how to make the columns have the same number of rows and I do not know how to call on specific files.
My initial setup is as followed
library("rhdf5")
library("ggplot2")
library("fs")
library("tidyverse")
wd <- "D:/Data/1282-1329/"
setwd(wd)
testh5 <- H5Fopen("1282.h5")
H5Fclose(testh5)
y <- h5read(file = "1282.h5",
name = "/Signal")
x <- h5read(file = "1282.h5",
name = "/Scan")
The / refers to the H5 files 'Group' and the Signal or Scan refers to the 'Name', thus "/Signal" creates a numerical list with a length of 48 (number of files within 1282-1329). I make multiple lists from each of these by doing
file_paths <- fs::dir_ls("D:/Data/1282-1329/H5")
file_paths
file_Scan <- list()
for (i in seq_along(file_paths)) {
file_Scan[[i]] <- h5read(
file = file_paths[[i]],
name = "/Scan"
)
}
file_Signal <- list()
for (i in seq_along(file_paths)) {
file_Signal[[i]] <- h5read(
file = file_paths[[i]],
name = "/Signal"
)
}
file_Scan <- setNames(file_Scan, file_paths)
file_Signal <- setNames(file_Signal, file_paths)
Thus str(file_Signal) gives me something like..
List of 48
$ D:/Data/1282-1329/H5/1282.h5: num [1:8044(1d)] 11569527 11576106 10848312 11007212 11074822 ...
$ D:/Data/1282-1329/H5/1283.h5: num [1:8045(1d)] 9746633 9886735 10000637 9617273 ...
So my first problem here is [1:8044(1d)] and [1:8045(1d)] - they're one row off. But I'm unable to add in NAs or make the lengths the same as I would a normal list. Is it because I'm thinking about this wrong? I feel like the solution is simple.
My ultimate goal will be to create multiple single plots for each of these files in the directory using something like
for (i in seq_along(file_paths)) {
plots[[i]] = ggplot(file_paths, aes(x=file_Signal, y=file_Scan))+
geom_point(size=1)
}
Then use these to create a rolling gif of the files with Even numbers (1282, 1284, 1286, etc) and Odd numbers (1283, 1285, 1287, etc.)
Thank you for any help or resources to might have to offer.