MWAA in productions - tasks queued for unknown reasons - airflow

Does anyone use MWAA in production?
We currently have around 500 DAGs running and we see an unexpected behavior with tasks staying in a "queued" state for unknown reasons.
Task is in the 'queued' state which is not a valid state for
execution. The task must be cleared in order to be run.
It happens randomly, can perfectly run for a day and then a few tasks will stay queued. The tasks will stay in this state forever unless we mark them as failed manually.
A DAG run can stay in this "queued" state even if the pool is empty, I don't see any reasons explaining this.
It happens to ~5% of the tasks with all the others running smoothly.
Did you ever encounter this behavior?

This was happening to me in MWAA as well. The solution, recommended to me by AWS, was adding to Airflow configuration options via the web UI the following options:
celery.sync_parallelism = 1
core.dag_file_processor_timeout = 150
core.dagbag_import_timeout = 90
core.min_serialized_dag_update_interval = 300
scheduler.dag_dir_list_interval = 600
scheduler.min_file_process_interval = 300
scheduler.parsing_processes = 2
scheduler.processor_poll_interval = 60

Related

DAG's task initialization takes time

We have a composer environment which has below configuration details.
Composer Version:  composer-1.10.0-airflow-1.10.6
Machine Type : n1-standard-4
Disk size (GB): 100
Worker Nodes: 6
python version:3
worker_concurrency: 32
parallelism:128
We have a problem in DAG to initialize it's task and it is taking more time. For example DAG has 3 tasks like Task1 -> Task2 -> Task3. Task1 initializes taking time (minimum 5 mins) and once initialized completion time of that task within seconds. Task2 initialized taking again 5 mins and executed within seconds. Like that task's initialization is taking time but completion of that task is quickly done. Have scheduled this DAG every 5 mins, but completing this DAG takes around 10 mins at least. So affecting functionalities and execution of the process.
Here are the functionalities of each three tasks. Task1 objective is to gather the basic information such as storage location from configuration files/variables. Task2 checks the storage whether any new files are coming and based on the file triggers the relevant DAGs. Task3 objective is to send success email.
Also, I noted that worker nodes did not splitted the work among themselves. Always one worker node's CPU utilization is high compared to other worker nodes. Do not know what could be the reason for it. One more interesting is even though the other DAG's are not running at that time this DAG still takes 10 mins to execute.
Appreciated your help in solving this case.
This should be a comment but I don't have the reputation required.
My initial advice is to upgrade your Composer version, 1.10.0 has a few known bugs that are fixed in later versions. Right now the latest version is 1.10.4. This should correct the CPU that stays at 100% (it did in our case). Are there many other DAGs running on your instance?
As I mentioned in the comment the reason behind the high CPU pressure on the particular GKE node might be more evident after the troubleshooting performed on Airflow workflow/GKE sides.
It is happening regularly that on some Aiflow runtime node the computation resources (Memory/CPU) are running out of the node capacity causing Airflow workloads(Pods) being Evicted and further restarted loosing all the process states data, however Celery executor which is responsible for assigning tasks to the Airflow workers can even be not aware about inconvenient state/time-out of the worker and doesn't keep the certain action to re-assign this task to another worker.
According to GCP Composer release notes, the vendor has provided some essential fixes in the latest composer-1.10.* patches, improving Composer runtime performance and reability, as #parakeet said in his answer.
You can also refer to this GCP Composer known issues knowledge base to keep track of the current problems and workarounds that vendor shares to the community.

Airflow Dependencies Blocking Task From Getting Scheduled

I have an airflow instance that had been running with no problem for 2 months until Sunday. There was a blackout in a system on which my airflow tasks depend and some tasks where queued for 2 days. After that we decided it was better to mark all the tasks for that day as failed and just lose that data.
Nevertheless, now all the new tasks get trigger at the proper time but they are never being set to any state (neither queued nor running). I check the logs and I see this output:
Dependencies Blocking Task From Getting Scheduled
All dependencies are met but the task instance is not running. In most cases this just means that the task will probably be scheduled soon unless:
The scheduler is down or under heavy load
The following configuration values may be limiting the number of queueable processes: parallelism, dag_concurrency, max_active_dag_runs_per_dag, non_pooled_task_slot_count
This task instance already ran and had its state changed manually (e.g. cleared in the UI)
I get the impression the 3rd topic is the reason why it is not working.
The scheduler and the webserver were working, however I restarted the scheduler and still I am having the same outcome. I also deleted the data in mysql database for one job and it is still not running.
I also saw a couple of post that said it is not running because the depens_on_past was set to true and if the previous runs failed, the next one will never be executed. I also checked it and it is not my case.
Any input would be really apreciated.
Any ideas? Thanks
While debugging a similar issue i found this setting: AIRFLOW__SCHEDULER__MAX_DAGRUNS_PER_LOOP_TO_SCHEDULE (or http://airflow.apache.org/docs/apache-airflow/2.0.1/configurations-ref.html#max-dagruns-per-loop-to-schedule), checking the airflow code it seems that the scheduler queries for dagruns to examine (consider to run ti's for), this query is limited to that number of rows (or 20 by default). So if you have >20 dagruns that are in some way blocked (in our case because ti's were on up-for-retry), then it won't consider other dagruns even though these could run fine.

Airflow 1.9.0 is queuing but not launching tasks

Airflow is randomly not running queued tasks some tasks dont even get queued status. I keep seeing below in the scheduler logs
[2018-02-28 02:24:58,780] {jobs.py:1077} INFO - No tasks to consider for execution.
I do see tasks in database that either have no status or queued status but they never get started.
The airflow setup is running https://github.com/puckel/docker-airflow on ECS with Redis. There are 4 scheduler threads and 4 Celery worker tasks. For the tasks that are not running are showing in queued state (grey icon) when hovering over the task icon operator is null and task details says:
All dependencies are met but the task instance is not running. In most cases this just means that the task will probably be scheduled soon unless:- The scheduler is down or under heavy load
Metrics on scheduler do not show heavy load. The dag is very simple with 2 independent tasks only dependent on last run. There are also tasks in the same dag that are stuck with no status (white icon).
Interesting thing to notice is when I restart the scheduler tasks change to running state.
Airflow can be a bit tricky to setup.
Do you have the airflow scheduler running?
Do you have the airflow webserver running?
Have you checked that all DAGs you want to run are set to On in the web ui?
Do all the DAGs you want to run have a start date which is in the past?
Do all the DAGs you want to run have a proper schedule which is shown in the web ui?
If nothing else works, you can use the web ui to click on the dag, then on Graph View. Now select the first task and click on Task Instance. In the paragraph Task Instance Details you will see why a DAG is waiting or not running.
I've had for instance a DAG which was wrongly set to depends_on_past: True which forbid the current instance to start correctly.
Also a great resource directly in the docs, which has a few more hints: Why isn't my task getting scheduled?.
I'm running a fork of the puckel/docker-airflow repo as well, mostly on Airflow 1.8 for about a year with 10M+ task instances. I think the issue persists in 1.9, but I'm not positive.
For whatever reason, there seems to be a long-standing issue with the Airflow scheduler where performance degrades over time. I've reviewed the scheduler code, but I'm still unclear on what exactly happens differently on a fresh start to kick it back into scheduling normally. One major difference is that scheduled and queued task states are rebuilt.
Scheduler Basics in the Airflow wiki provides a concise reference on how the scheduler works and its various states.
Most people solve the scheduler diminishing throughput problem by restarting the scheduler regularly. I've found success at a 1-hour interval personally, but have seen as frequently as every 5-10 minutes used too. Your task volume, task duration, and parallelism settings are worth considering when experimenting with a restart interval.
For more info see:
Airflow: Tips, Tricks, and Pitfalls (section "The scheduler should be restarted frequently")
Bug 1286825 - Airflow scheduler stopped working silently
Airflow at WePay (section "Restart everything when deploying DAG changes.")
This used to be addressed by restarting every X runs using the SCHEDULER_RUNS config setting, although that setting was recently removed from the default systemd scripts.
You might also consider posting to the Airflow dev mailing list. I know this has been discussed there a few times and one of the core contributors may be able to provide additional context.
Related Questions
Airflow tasks get stuck at "queued" status and never gets running (especially see Bolke's answer here)
Jobs not executing via Airflow that runs celery with RabbitMQ
Make sure you don't have datetime.now() as your start_date
It's intuitive to think that if you tell your DAG to start "now" that it'll execute "now." BUT, that doesn't take into account how Airflow itself actually reads datetime.now().
For a DAG to be executed, the start_date must be a time in the past, otherwise Airflow will assume that it's not yet ready to execute. When Airflow evaluates your DAG file, it interprets datetime.now() as the current timestamp (i.e. NOT a time in the past) and decides that it's not ready to run. Since this will happen every time Airflow heartbeats (evaluates your DAG) every 5-10 seconds, it'll never run.
To properly trigger your DAG to run, make sure to insert a fixed time in the past (e.g. datetime(2019,1,1)) and set catchup=False (unless you're looking to run a backfill).
By design, an Airflow DAG will execute at the completion of its schedule_interval
That means one schedule_interval AFTER the start date. An hourly DAG, for example, will execute its 2pm run when the clock strikes 3pm. The reasoning here is that Airflow can't ensure that all data corresponding to the 2pm interval is present until the end of that hourly interval.
This is a peculiar aspect to Airflow, but an important one to remember - especially if you're using default variables and macros.
Time in Airflow is in UTC by default
This shouldn't come as a surprise given that the rest of your databases and APIs most likely also adhere to this format, but it's worth clarifying.
Full article and source here
I also had a similar issue, but it is mostly related to SubDagOperator with more than 3000 task instances in total (30 tasks * 44 subdag tasks).
What I found out is that airflow scheduler mainly responsible for putting your scheduled tasks in to "Queued Slots" (pool), while airflow celery workers is the one who pick up your queued task and put it into the "Used Slots" (pool) and run it.
Based on your description, your scheduler should work fine. I suggest you check your "celery workers" log to see whether there is any error, or restart it to see whether it helps or not. I experienced some issues that celery workers normally go on strike for a few minutes then start working again (especially on SubDagOperator)
One of the very silly reasons could be that the DAG is "paused" which is the default state for the first time. I lost around 2 hrs fighting it. If you are using Airflow Web interface, then this shows up as a toggle next to your DAG in the list
I am facing the issue today and found that bullet point 4 from tobi6 answer below worked out and resolved the issue
*'Do all the DAGs you want to run have a start date which is in the past?'*
I am using airflow version v1.10.3
My problem was one step further, in addition to my tasks being queued, I couldn't see any of my celery workers on the Flower UI. The solution was that, since I was running my celery worker as root I had to make changes in my ~/.bashrc file.
The following steps made it work:
Add export C_FORCE_ROOT=true to your ~/.bashrc file
source ~/.bashrc
Run worker : nohup airflow worker $* >> ~/airflow/logs/worker.logs &
Check your Flower UI at http://{HOST}:5555
I think it's worth mentioning that there's an open issue that can cause tasks to fail to run with no obvious reason: https://issues.apache.org/jira/browse/AIRFLOW-5506
The problem seems to occur when using LocalScheduler connected to a PostgreSQL airflow db, and results in the scheduler logging a number of "Killing PID xxxx" lines. Check the scheduler logs after the DAGs have been stalled without starting any new tasks for a while.
You can try to stop the webserver and the scheduler:
ps -ef | grep airflow #show the process id
kill 1234 #kill the webserver
kill 5678 #kill the scheduler
Remove the files from the airflow folder if they exist (they will be created again):
airflow-scheduler.err
airflow-scheduler.pid
airflow-webserver.err
airflow-webserver.pid
Start the webserver and the scheduler again.
airflow webserver -D
airflow scheduler -D
-D will make the services run in the background.
I had a similar issue of a triggered DAG "running" indefinitely because its first task stuck in "queued" state.
I realized this was because of a "ghost" DAG that actually changed name. It seems that since the DAG has run in the past (had data in the postgresDG) and was referenced as child-DAG in other DAGs, the trigger of the parent DAGs referencing the old name would "resurrect" the old DAG name, but with the new code. Indeed the old DAG name and new DAG code did not match, thus producing an "infinite queued execution" bug.
Solution:
Delete the all the previous DAG runs of the previous DAG-runs with the old name
Restart everything (webserver, worker, executor,...) OR Delete relevant DAGs (with the "delete DAG" button in the UI).
The interpretation of the bug can vary but this fix worked in my case.
One more thing to check is whether "the concurrency parameter of your DAG reached?".
I'd experienced the same situation when some task was shown as NO STATUS.
It turned out that my File_Sensor tasks were run with timeout set up to 1 week, while DAG time out was only 5 hours. That leaded to the case when the Files were missing, many sensors tasked were running at the same time. Which results the concurrency overloaded!
The depending tasks couldn't be started before the sensor task succeed, when the dag timeout, they got NO STATUS.
My solution:
Carefully set tasks and DAG timeout
Increase dag_concurrency in airflow.cfg file in AIRFLOW_HOME folder.
Please refer to the docs.
https://airflow.apache.org/faq.html#why-isn-t-my-task-getting-scheduled
I believe this is an issue with celery version 4.2.1 and redis 3.0.1 as described here:
https://github.com/celery/celery/issues/3808
we resolved the issue by downgrading our redis version 2.10.6:
redis==2.10.6
In my case, tasks were not being launched because I had for all operators a pool configured and hadn't created it, hence, tasks were not even scheduled. An operator looks like:
foo = DummyOperator(
task_id='foo',
dag=dag,
pool='capser'
)
To create a pool go to Admin > Pools > Create and set slots, for example, 128, which runs successfully for me. You can also configure by using the CLI.
counter intuitive UI message!
I have spent days on this. So want to elaborate on my specific issue (s).
Each dag has a state. By default the state could be 'pause' or 'not pause'.
The first confusion arises from - what is the default state on startup? The UI message attached seems to indicate that the state is 'not pause' and on clicking the toggle, it pauses.
In reality, the default state is 'pause'. This state can be controlled by settings, environment variables, parameters and UI. I have detailed them below.
The second confusion arises because of the UI again. When we manually trigger a dag which is in the pause state. The UI shows the dag as running (green circle)! But the dag is actually in the 'pause' state. The tasks will not execute unless it is 'un-paused'.
If we read the task instance details. The message would be
Task is in the 'None' state which is not a valid state for execution. The task must be cleared in order to be run.
What is the 'None' state!? And clear which task?!
The actual problem is that the dag is in the pause state. On toggling the dag state the tasks would start to execute.
The pause state of the dag can be changed by
clicking the button on the UI.
set your particular dag to run, by adding the below parameter to your dag
DAG(dag_id='your-dag', is_paused_upon_creation=True)
setting the config variable in airflow.cfg file. (caution: this will start all your dags including the example ones)
dags_are_paused_at_creation = FALSE
configuring an environment variable before starting up the scheduler/webserver.(caution: this will start all your dags including the example ones)
AIRFLOW__CORE__DAGS_ARE_PAUSED_AT_CREATION=False
Make sure that your task is assigned to the same queue, that your workers is listening to. This means that in your DAG file you have to set 'queue': 'queue_name' and in your worker configuration you have to set either default_queue = 'queue_name' in the airflow.cfg or AIRFLOW__OPERATORS__DEFAULT_QUEUE: 'queue_name' in the docker-compose.yaml (in case you're using Docker).

Next Instance of Job Runs Before I Can Debug This Instance

When I'm developing on Airflow and turn my DAG on, it'd fail on, say, Step 6, and Steps 7-9 would not start. But before I can debug the issue, the next instance (I'm putting the start_date in the past) will start and run all the way to Step 5 and fail on Step 6, completely messing up my workflow. Is this behavior expected, or could it be turned off, such that the next instance doesn't start until this instance is green everywhere?
Check the docs for the following two options you can set on the operators.
depends_on_past (bool) – when set to true, task instances will run sequentially while relying on the previous task’s schedule to succeed. The task instance for the start_date is allowed to run.
wait_for_downstream (bool) – when set to true, an instance of task X will wait for tasks immediately downstream of the previous instance of task X to finish successfully before it runs. This is useful if the different instances of a task X alter the same asset, and this asset is used by tasks downstream of task X. Note that depends_on_past is forced to True wherever wait_for_downstream is used.
Reference: https://airflow.incubator.apache.org/code.html#models

How to prevent a Hangfire recurring job from restarting after 30 minutes of continuous execution

I am working on an asp.net mvc-5 web application, and I am facing a problem in using Hangfire tool to run long running background jobs. the problem is that if the job execution exceed 30 minutes, then hangfire will automatically initiate another job, so I will end up having two similar jobs running at the same time.
Now I have the following:-
Asp.net mvc-5
IIS-8
Hangfire 1.4.6
Windows server 2012
Now I have defined a hangfire recurring job to run at 17:00 each day. The background job mainly scan our network for servers and vms and update the DB, and the recurring job will send an email after completing the execution.
The recurring job used to work well when its execution was less than 30 minutes. But today as our system grows, the recurring job completed after 40 minutes instead of 22-25 minutes as it used to be. and I received 2 emails instead of one email (and the time between the emails was around 30 minutes). Now I re-run the job manually and I have noted that that the problem is as follow:-
"when the recurring job reaches 30 minutes of continuous execution, a
new instance of the recurring job will start, so I will have two
instances instead of one running at the same time, so that why I received 2 emails."
Now if the recurring job takes less than 30 minutes (for example 29 minute) I will not face any problem, but if the recurring job execution exceeds 30 minutes then for a reason or another hangfire will initiate a new job.
although when I access the hangfire dashboard during the execution of the job, I can find that there is only one active job, when I monitor our DB I can see from the sql profiler that there are two jobs accessing the DB. this happens after 30 minutes from the beginning of the recurring job (at 17:30 in our case), and that why I received 2 emails which mean 2 recurring jobs were running in the background instead of one.
So can anyone advice on this please, how I can avoid hangfire from automatically initiating a new recurring job if the current recurring job execution exceeds 30 minutes?
Thanks
Did you look at InvisibilityTimeout setting from the Hangfire docs?
Default SQL Server job storage implementation uses a regular table as
a job queue. To be sure that a job will not be lost in case of
unexpected process termination, it is deleted only from a queue only
upon a successful completion.
To make it invisible from other workers, the UPDATE statement with
OUTPUT clause is used to fetch a queued job and update the FetchedAt
value (that signals for other workers that it was fetched) in an
atomic way. Other workers see the fetched timestamp and ignore a job.
But to handle the process termination, they will ignore a job only
during a specified amount of time (defaults to 30 minutes).
Although this mechanism ensures that every job will be processed,
sometimes it may cause either long retry latency or lead to multiple
job execution. Consider the following scenario:
Worker A fetched a job (runs for a hour) and started it at 12:00.
Worker B fetched the same job at 12:30, because the default invisibility timeout was expired.
Worker C (did not fetch) the same job at 13:00, because (it
will be deleted after successful performance.)
If you are using cancellation tokens, it will be set for Worker A at
12:30, and at 13:00 for Worker B. This may lead to the fact that your
long-running job will never be executed. If you aren’t using
cancellation tokens, it will be concurrently executed by WorkerA and
Worker B (since 12:30), but Worker C will not fetch it, because it
will be deleted after successful performance.
So, if you have long-running jobs, it is better to configure the
invisibility timeout interval:
var options = new SqlServerStorageOptions
{
InvisibilityTimeout = TimeSpan.FromMinutes(30) // default value
};
GlobalConfiguration.Configuration.UseSqlServerStorage("<name or connection string>", options);
As of Hangfire 1.5 this option is now Obsolete. Jobs that are being worked on are invisible to other workers.
Say goodbye to confusing invisibility timeout with unexpected
background job retries after 30 minutes (by default) when using SQL
Server. New Hangfire.SqlServer implementation uses plain old
transactions to fetch background jobs and hide them from other
workers.
Even after ungraceful shutdown, the job will be available for other
workers instantly, without any delays.
I was having trouble finding documentation on how to do this properly for a Postgresql database, every example I was see is using sqlserver, I found how the invisibility timeout was a property inside the PostgreSqlStorageOptions object, I found this here : https://github.com/frankhommers/Hangfire.PostgreSql/blob/master/src/Hangfire.PostgreSql/PostgreSqlStorageOptions.cs#L36. Luckily through trial and error I was able to figure out that the UsePostgreSqlStorage has an overload to accept this object. For .Net Core 2.0 when you are setting up the hangfire postgresql DB in the ConfigureServices method in the startup class add this(the default timeout is set to 30 mins):
services.AddHangfire(config =>
config.UsePostgreSqlStorage(Configuration.GetConnectionString("Hangfire1ConnectionString"), new PostgreSqlStorageOptions {
InvisibilityTimeout = TimeSpan.FromMinutes(720)
}));
I had this problem when using Hangfire.MemoryStorage as the storage provider. With memory storage you need to set the FetchNextJobTimeout in the MemoryStorageOptions, otherwise by default jobs will timeout after 30 minutes and a new job will be executed.
var options = new MemoryStorageOptions
{
FetchNextJobTimeout = TimeSpan.FromDays(1)
};
GlobalConfiguration.Configuration.UseMemoryStorage(options);
Just would like to point out that even though, it is stated the thing below:
As of Hangfire 1.5 this option is now Obsolete. Jobs that are being worked on are invisible to other workers.
Say goodbye to confusing invisibility timeout with unexpected background job retries after 30 minutes (by default) when using SQL Server. New Hangfire.SqlServer implementation uses plain old transactions to fetch background jobs and hide them from other workers.
Even after ungraceful shutdown, the job will be available for other workers instantly, without any delays.
It seems that for many people using MySQL, PostgreSQL, MongoDB, InvisibilityTimeout is still the way to go: https://github.com/HangfireIO/Hangfire/issues/1197

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