Related
I have a plot like this:
library(ggplot2)
library(reshape2)
library(ggh4x)
data <- data.frame(col1=c("Sample1","Sample2","Sample3","Sample4","Sample5","Sample6"),
col2=c(0.5,0.1,0.4,0.05,0.05,0.9),
col3=c(0.6,0.1,0.3,0.1,0.1,0.8),
col4=c(0.5,0.3,0.2,0.05,0.15,0.8),
col5=c("a","a","a","b","b","b"),
col6=c("c","c","c","c","c","c"))
data2 <- melt(data)
ggplot(data=data2, aes(x = variable, y = value, fill=col1))+
geom_bar(position="stack", stat="identity")+
scale_fill_manual(values=c("#e6194B","#ffe119","#f58231","#911eb4","#42d4f4","#bfef45")) +
scale_y_continuous(expand = c(0, 0),labels = scales::percent) +
facet_nested(~col6 + ~col5, scales = "free_x",space = "free_x",switch = "x") +
ggtitle("Title") +
theme_classic() +
theme(strip.text.y = element_text(angle=0),legend.position = "right",
legend.key.size = unit(0.4, 'cm'),
axis.line = element_line(colour = "black"),
axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1),
strip.placement = "outside",
strip.background = element_rect(color = "white", fill = "white"),
axis.title = element_blank()) +
guides(fill=guide_legend(title=NULL, ncol = 1)) +
xlab("X axis") +
ylab("Y axis")
Which creates a barplot like this:
Please take a look
My question is simple, how can I set y-axis starting value to 10% instead of 0% (without changing the code too much). All answers are greatly appreciated! (Similar questions are checked, without success...)
While in general not recommended for bar charts one option to "set" the starting point would be to set the limits via coord_cartesian:
library(ggplot2)
library(ggh4x)
ggplot(data = data2, aes(x = variable, y = value, fill = col1)) +
geom_bar(position = "stack", stat = "identity") +
scale_fill_manual(values = c("#e6194B", "#ffe119", "#f58231", "#911eb4", "#42d4f4", "#bfef45")) +
scale_y_continuous(expand = c(0, 0), labels = scales::percent) +
facet_nested(~ col6 + ~col5, scales = "free_x", space = "free_x", switch = "x") +
ggtitle("Title") +
theme_classic() +
theme(
strip.text.y = element_text(angle = 0), legend.position = "right",
legend.key.size = unit(0.4, "cm"),
axis.line = element_line(colour = "black"),
axis.text.x = element_text(angle = 90, vjust = 0.5, hjust = 1),
strip.placement = "outside",
strip.background = element_rect(color = "white", fill = "white"),
axis.title = element_blank()
) +
guides(fill = guide_legend(title = NULL, ncol = 1)) +
xlab("X axis") +
ylab("Y axis") +
coord_cartesian(ylim = c(.1, NA))
By running this code :
g <- ggplot(results_table, aes(x = "", y = Pct*100,
fill = factor(results_table$Criteria, as.character(results_table$Criteria))),width = 0.5) +
geom_bar(stat = "identity") +
scale_color_manual(values = Palcolor) +
scale_fill_manual(values = Palcolor) +
coord_polar(theta = "y", start = 0, direction = -1) +
theme_minimal() +
theme(legend.position = "bottom", legend.title=element_blank(), axis.title.x = element_blank(),,
axis.title.y = element_blank(), panel.border = element_blank(), panel.grid = element_blank(),
axis.text = element_blank(), axis.ticks = element_blank(),
plot.title = element_text(size = 14, hjust = 0.5, vjust = 0)) +
guides(fill = guide_legend(nrow = 4, byrow = TRUE)) +
theme(
legend.key.height = unit(0.3, "lines"), #smaller squares
legend.key.width = unit(0.7, "lines"), #smaller squares
legend.margin=margin(l = 40, unit='pt'),
legend.text = element_text(margin = margin(r = 60, unit = "pt"))) +
xlab("") +
ylab("") +
geom_text(aes(x = 1.70, y =Pct*100/2 + c(0, cumsum(Pct*100)[-length(Pct*100)]),
label = paste0(sprintf("%0.1f", round(Pct*100, digits = 1)),"%")),
size = 3.2) +
labs(title = gTitle)
}
I get this pie chart :
As you can see, the slices and the color are right, but the labels are reversed. If I use
position = position_stack (vjust = 0.5, reverse = TRUE)
in geom_text, it reduces the whole pie to a small slice, then it doesn't fix my issue.
The solution is to substract the result of the formula for y in geom_text from 100 :
`geom_text(aes(x = 1.70, y = 100-(Pct*100/2 + c(0, cumsum(Pct*100)[-length(Pct*100)])),
label = paste0(sprintf("%0.1f", round(Pct*100, digits = 1)),"%")),
size = 3.2)'
I have the formula below:
ggplot(Errortrialsmodifyoriginal, aes(x = Target, y = Absolutefirststoperror, color = as.character(Type), shape = as.character(Type))) +
geom_point(shape=16)+
geom_point(data=Errortrialoriginal,shape=19,size = 4,mapping=aes(x=Target, y=Absolutefirststoperror)) +
geom_line(data=Errortrialoriginal,aes(group=Type,linetype=Type),size=2,) +
scale_color_manual(name = "Condition", values = c("red","green","blue","red","green","blue")) +
scale_linetype_manual(name = "Condition",values = c("dashed","dashed","dashed","solid","solid","solid")) +
geom_errorbar(data=Errortrialoriginal,mapping=aes(x=Target, ymin=Absolutefirststoperror-SE,ymax=Absolutefirststoperror+SE),size=0.5) +
theme_bw() + guides(color = guide_legend("Condition"), shape = guide_legend("Condition"), linetype = guide_legend("Condition")) +
labs(x = "Target distance (vm)", y = "Absolute error in stop location (vm)") +
theme(axis.title.x = element_text(size=14, face="bold"), axis.title.y = element_text(size=14, face="bold"),legend.text=element_text(size=14),title=element_text(size=14,face="bold"), plot.title = element_text(hjust = 0.5), legend.title = element_text(size=14,face="bold"), axis.text.x=element_text(size=14),axis.text.y=element_text(size=14),panel.grid.major = element_blank(), panel.grid.minor = element_blank())
Which produces the graph:
How can I change my command to ensure that the dashed and solid lines are shown in the figure legend; because at the moment, the figure legend suggests that all the lines are solid, even though they are not?
I would be grateful for any advice!
To my opinion, the legend is correctly displayed but you can't see it because you have big points front of the linetype. You should increase the legend box to see it.
Here an example with this dummy example:
library(ggplot2)
ggplot(my_data, aes(x = dose, y = length, color = supp, linetype = supp))+
geom_line()+
geom_point(size = 4)
library(ggplot2)
ggplot(my_data, aes(x = dose, y = length, color = supp, linetype = supp))+
geom_line()+
geom_point(size = 4)+
theme(legend.key.size = unit(3,"line"))
So, with your code, you can do something like that:
library(ggplot2)
ggplot(Errortrialsmodifyoriginal,
aes(x = Target,
y = Absolutefirststoperror,
color = Type)) +
geom_point()+
geom_line(data=Errortrialoriginal,
aes(group=Type,
linetype=Type)) +
scale_color_manual(name = "Condition", values = rep(c("red","green","blue"),2)) +
scale_linetype_manual(name = "Condition",values = rep(c("dashed","solid"),each =3)) +
geom_errorbar(data=Errortrialoriginal,
mapping=aes(x=Target,
ymin=Absolutefirststoperror-SE,
ymax=Absolutefirststoperror+SE),size=0.5) +
theme_bw() +
guides(color = guide_legend("Condition"), shape = guide_legend("Condition"), linetype = guide_legend("Condition")) +
labs(x = "Target distance (vm)", y = "Absolute error in stop location (vm)") +
theme(axis.title.x = element_text(size=14, face="bold"),
axis.title.y = element_text(size=14, face="bold"),
legend.text=element_text(size=14),
title=element_text(size=14,face="bold"),
plot.title = element_text(hjust = 0.5),
legend.title = element_text(size=14,face="bold"),
axis.text.x=element_text(size=14),
axis.text.y=element_text(size=14),
panel.grid.major = element_blank(),
panel.grid.minor = element_blank(),
legend.key.size = unit(3,"line"))
Does it answer your question ?
If not, please consider providing a reproducible example of your dataset (see: How to make a great R reproducible example)
I have this plot, but i want to change around the order of the X axis labels.
It should start with the site number (eg. X27a, X28a, W15c, W17c) Then the group (eg. A, B, C, D) and then the last one.
So basically i want the very bottom row of labels at the top.
How do i reorder it?
Code
ggplot(data = inf, aes(x = COMPARTMENT, y = MI, fill = SPECIES)) +
geom_bar(stat = "identity") +
scale_y_continuous(expand = c(0, 0), limits = c(-0.1, 12.5), breaks = 2*c(0:6)) +
theme_bw() +
facet_grid(~COMP.COMP*REGION, switch = "x", scales = "free_x", space = "free_x") +
theme(strip.text.x = element_text(size = 10)) +
theme(axis.text.x = element_text(angle = 90, hjust = 1, vjust = 0.5, size = 10)) +
theme(panel.spacing = unit(0, "lines"),
strip.background = element_blank()) +
scale_fill_manual(name = "SPECIES",
values=c("#999999", "#E69F00", "#56B4E9", "#009E73", "#F0E442", "#0072B2")) +
ylab("Average infestation rate (%)") +
xlab("Compartment by Comparable Groups by Region") +
theme(panel.grid.major.y = element_line("lightgray"),
panel.grid.major.x = element_blank()) +
theme(axis.line = element_line(color = "black"),
legend.position = "right",
legend.title=element_text())
I would like to know if it's possible to modify the ticks of x axis with a ggplot pie chart.
Here what I can do :
# Some colors
couleurs <- data.frame(
id=seq(1,17,1),
mix=c(c(rep(1,6),rep(2,7),rep(3,4))),
html=c("#A00020","#109618","#388EE4","#C484D1","#FFAA33","#CCCDD0","#004AC5","#F80094","#CB5023","#638995","#33CFCF","#95DC4E","#F7D633","#5C403C","#F72020","#00D96C","#FDE4C5")
)
couleurs$html <- factor(couleurs$html, levels = couleurs$html[order(couleurs$id, decreasing = FALSE)])
# Data
activite <- data.frame(label=c("B to B","B to C","B to B / B to C", "B to B"), cible=c(rep("Externe",3), "Interne"), nb=c(12,9,3,12))
activite$label <- factor(activite$label, levels = activite$label[order(activite$nb[activite$cible=="Externe"], decreasing = TRUE)])
library(plyr)
activite<-ddply(activite,.(cible),transform,pc=(nb/sum(nb))*100)
activite
# Pie chart
library(ggplot2)
ggplot(data = activite, aes(x = "", y = nb, fill = label )) +
geom_bar(stat = "identity", position = position_fill(), width = 1) +
coord_polar(theta= "y", start = 0, direction = -1) +
labs(fill="") +
scale_fill_manual(values=as.character(couleurs$html[1:nrow(activite)]), labels=paste(activite$label,"\t\t\t",sep="")) +
geom_text(aes(label = paste(pc,"%", sep=" ")), size=4, colour = "white", fontface = "bold", position = position_fill(vjust = 0.5)) +
theme(strip.text = element_text(size=20, face = "bold", ), strip.background = element_rect(fill="grey75")) +
theme(panel.background = element_rect(fill = "white")) +
theme(plot.background = element_rect(fill = "grey92")) +
theme(legend.position="bottom", legend.background = element_rect(fill="grey92")) +
theme(legend.key = element_blank()) +
theme(panel.grid.minor = element_blank(), panel.grid.major = element_line(colour = "grey75")) +
theme(axis.text.y = element_blank()) +
theme(axis.ticks.length = unit(0, "mm")) +
theme(axis.title.x = element_blank(),axis.title.y = element_blank()) +
theme(legend.box.spacing = unit(1, "mm")) +
facet_wrap(~ cible)
Here my result:
After several hours of serach, I didn't find a solution to create what I want. The exact same pie chart but with personalised ticks like that :
With these particular conditions :
- do not change the direction of the data in the pie chart, I want it like exactly this
- if possible (but if not possible, it's okay), I would like the ticks' labels not superposed with the axis.
If someone can help me, I would really appreciate.
Here's one solution:
ggplot(data = activite %>%
group_by(cible) %>%
arrange(desc(nb)) %>%
mutate(axis.label = cumsum(nb),
axis.position = cumsum(pc)/100) %>%
mutate(axis.label = ifelse(pc == min(pc),
paste(axis.label, "0", sep = "-"),
axis.label)),
aes(x = 1, y = nb, fill = label )) +
geom_segment(aes(x = 1, xend = 1.6, y = axis.position, yend = axis.position),
colour = "grey75") +
geom_vline(xintercept = 1.6, colour = "grey75") +
geom_bar(stat = "identity", position = position_fill(reverse = T), width = 1) +
coord_polar(theta= "y", start = 0, direction = 1) +
labs(fill="") +
scale_fill_manual(values=as.character(couleurs$html[1:nrow(activite)]), labels=paste(activite$label,"\t\t\t",sep="")) +
geom_text(aes(label = paste(pc,"%", sep=" ")), size=4, colour = "white",
fontface = "bold", position = position_fill(vjust = 0.5, reverse = T)) +
geom_text(aes(x = 1.7, label = axis.label), size = 3,
position = position_fill(reverse = T)) +
theme(strip.text = element_text(size=20, face = "bold", ), strip.background = element_rect(fill="grey75")) +
theme(panel.background = element_rect(fill = "white")) +
theme(plot.background = element_rect(fill = "grey92")) +
theme(legend.position="bottom", legend.background = element_rect(fill="grey92")) +
theme(legend.key = element_blank()) +
theme(panel.grid = element_blank()) +
theme(axis.text = element_blank()) +
theme(axis.ticks = element_blank()) +
theme(axis.title = element_blank()) +
theme(legend.box.spacing = unit(1, "mm")) +
facet_wrap(~ cible)
Explanation:
The sequence in your labels went clockwise, while the direction of the polar coordinates went counter-clockwise. That makes labelling rather troublesome. I switched the direction for polar coordinates, & added reverse = T inside the position adjustment calls for the geoms.
It's hard to assign different axis breaks to different facets of the same plot, so I didn't. Instead, I modified the data to include calculated axis labels / margin positions, added margins via geom_segment / geom_vline, & hid the axis text / ticks in theme().