How do I connect to the Docker Influxdb using the R client? - r

I am trying to make a connection to the Influx database using the R Influx DB client library to make a connection to a Influx database launched locally through Docker, here is the YAML file:
version: "3.7"
services:
influxdb:
image: influx
ports:
- "8086:8086"
- "8083:8083"
environment:
- INFLUX_DBNAME=exampledb
volumes:
- /Users/<user>/Desktop/influxdb/pv:/var/lib/influxdb
- /Users/<user>/Desktop/influxdb/influxdb.conf:/etc/influxdb/influxdb.conf:ro
deploy:
replicas: 1
restart_policy:
condition: on-failure
test:
build: ./test
image: test:latest
environment:
- INFLUX_ADDR=influxdb
- INFLUX_PORT=8086
- INFLUX_DBNAME=exampledb
- INFLUX_TBLNAME=exampletbl
depends_on:
- influxdb
deploy:
replicas: 1
restart_policy:
condition: on-failure
I obtained a influxdb.conf file:
local_machine$ docker run --rm influxdb influxd config > influxdb.conf
I modified the influxdb.conf file by setting auth-enabled to true and added a group named admin:
[http]
enabled = true
bind-address = ":8086"
auth-enabled = true
When I try to make a connection in R cli (or an R program in the test container) as follows:
>library(influxdbr)
>influx_conn <- influx_connection(host='influxdb', port=8086, user='admin', pass='admin')
I get the following error:
<HTML><HEAD>
<TITLE>Access Denied</TITLE>
</HEAD>
<BODY>
<FONT face="Helvetica">
<big><strong></strong></big><BR>
</FONT>
<blockquote>
<TABLE border=0 cellPadding=1 width="80%">
<TR><TD>
<FONT face="Helvetica">
<big>Access Denied (authentication_failed)</big>
<BR>
<BR>
</FONT>
</TD></TR>
<TR><TD>
<FONT face="Helvetica">
Your credentials could not be authenticated: "Credentials are missing.". You will not be permitted access until your credentials can be verified.
</FONT>
</TD></TR>
<TR><TD>
<FONT face="Helvetica">
This is typically caused by an incorrect username and/or password, but could also be caused by network problems.
</FONT>
</TD></TR>
<TR><TD>
<FONT face="Helvetica" SIZE=2>
<BR>
</FONT>
</TD></TR>
</TABLE>
</blockquote>
</FONT>
</BODY></HTML>
I tried exec'ing into the container and creating users and passwords and connecting with those, but I am still unable to connect. I am having a similar problem connecting using the Python client. I can curl into the Influxdb container, but I am unable to use the client library for either R or Python.
Based on comments, I also added a "group" in the config file at the bottom as specified in this R client connection example:
influxdb.config:
[admin]
scheme="http"
host="influxdb"
port=8086
user="admin"
pass="admin"
path="/"
# create connection object
# (here: based on a config file with group "admin" in it (s. package documentation))
con <- influx_connection(group = "admin")
Same error. So my question is, is there something else I need to set?

Related

Passing SQL credentials to shinyproxy app

I have a working shinyproxy app with LDAP authentication. However, for retrieving data from the SQL-database I now use (not recommended) a hardcoded connection string in my R code with the credentials mentioned herein (I use a service user because my end users don't have permissions to query the database):
con <- DBI::dbConnect(odbc::odbc(),
encoding = "latin1",
.connection_string = 'Driver={Driver};Server=Server;Database=dbb;UID=UID;PWD=PWD')
I tried to replace the connection string with an environmental variable, that I pass from my Linux host to the container. This works when running the container outside ShinyProxy, and thus by passing the environmental variables at runtime with the following Docker command:
docker run -it --env-file env.list app123
However, when using ShinyProxy, it is not clear to me how to configure this in the yaml config file. How do I pass the statement --env-file env.list at this level so that it is picked up in the linked containers?
Any help kindly appreciated!
From this closed issue: https://github.com/openanalytics/shinyproxy/issues/99
Your application.yaml could look something like this:
proxy:
title: Open Analytics Shiny Proxy
logo-url: http://www.openanalytics.eu/sites/www.openanalytics.eu/themes/oa/logo.png
landing-page: /
heartbeat-rate: 10000
heartbeat-timeout: 60000
port: 8080
authentication: simple
admin-groups: admin
# Example: 'simple' authentication configuration
users:
- name: admin
password: password
groups: admin
# Docker configuration
docker:
internal-networking: true
specs:
- id: 01_hello
display-name: Hello Application
description: Application which demonstrates the basics of a Shiny app
container-cmd: ["R", "-e", "shinyproxy::run_01_hello()"]
container-image: openanalytics/shinyproxy-demo
container-env-file: /app/shinyproxy/test.env
container-env:
bar: baz
access-groups: admin
container-network: shinyproxy_reprex_default
logging:
file:
shinyproxy.log
Specifically it seems you could set environment variables with a file using container-env-file.

Need Ansible playbook inorder to calculate number of users currently login into VPN

Writing ansible playbook for "Count number of users currently login to VPN".Using Junos modules as suggested by network team.I have installed below softwares on my RHEL 7 machine with Ansible 2.9 version installed.
Junos Ansible Requirements
===============================
-->Install Dependencies
# pip install ncclient
# pip install junos-eznc
--> Install Juniper.junos Galaxy role
ansible-galaxy install juniper.junos
---> Have NETCONF enabled on Juniper devices over SSH
# set system services netconf ssh
--->(Optional)
#pip install junos-netconify (python lib for juniper console)
Whenever i am writing any playbook, I am getting below error.
Playbook:-
---
- name: Get device uptime
hosts:
- dc1
roles:
- Juniper.junos
connection: local
gather_facts: no
vars_prompt:
- name: username
prompt: Junos Username
private: no
- name: password
prompt: Junos Password
private: yes
tasks:
- name: get uptime using galaxy module
junos_command:
commands: show system uptime
register: uptime
- name: display uptimes
debug: var=uptime
Error:-
PLAY [Get device uptime] **************************************************************************************************************
TASK [get uptime using galaxy module] *************************************************************************************************
fatal: [172.16.130.1]: FAILED! => {"changed": false, "msg": "invalid rpc for running in check_mode"}
PLAY RECAP ****************************************************************************************************************************
172.16.130.1 : ok=0 changed=0 unreachable=0 failed=1 skipped=0 rescued=0 ignored=0
I was just exploring ansible networking commands & got above error.Please suggest what configurations required working with junos.
Please find below playbook to check no. of users currently login to VPN:-
name: Get system users currently logged in
hosts: all
connection: local
gather_facts: no
roles:
Juniper.junos
tasks:
name: Retrieve facts from device running Junos OS
juniper_junos_facts:
name: Print version
debug:
var: junos.fqdn
name: Run RPC Commands
juniper_junos_command:
commands="show security dynamic-vpn users"
format=text
dest={{ junos.fqdn }}.output

Write a playbook, which access the network devices present in host file and check for host OS of the device (nexus/cisco/arista)

I am writing a playbook, which dynamically enters the network servers provided by user at prompt in host file.Further i want to create a task which will ssh on the server one by one and run show version command to fetch the OS of those network devices.
As of now, I am getting the below error:
1."Unable to automatically determine host network os. Please manually configure ansible_network_os value for this host"
I dont want to define the OS beforehand, rather want the playbook to do it.
I tried entering some configurations in host file as below:
[device]
192.1xx.xxx.xx
[all:vars]
ansible_connection=network_cli
ansible_user=user
ansible_ssh_pass=password
ssh_args = -o GSSAPIAuthentication=no
The below plsybook is taking device name from the user and adding it to the file, further it need to ssh on those servers and fetch the OS details:
---
- name: add host dynamically
hosts: localhost
gather_facts: no
vars:
Server: null_val1
vars_prompt:
- name: "Server"
prompt: "Please enter the non-reporting server/IP"
private: no
default: null_val1
pre_tasks:
- name: Save variable
set_fact:
Server: "{{Server}}"
- name: Copying servers to host file
hosts: localhost
become: true
tasks:
- name: copying variable value
lineinfile:
path: "{{playbook_dir}}/hosts.txt"
line: "{{Server}}"
insertafter: '^\[device\]'
state: present
- name: Main execution task
hosts: device
gather_facts: true
tasks:
- name: Run command on devices
cli_command:
command: show version
register: result
- name: display result
debug:
var: result.stdout_lines
The actual result should show me the OS of network device(s) entered in host file by running show version command remotely.

unauthorized: authentication required - trying to pull or run a public image

I'm trying to follow along this blog about using Docker with R.
I followed basic Docker set up steps and am able to run the hello world image.
I'm on a old 2009 Mac and had to use Docker Toolbox.
I'm in a place with weak internet connection and am using a personal hotspot.
Each time I try to run docker run --rm -p 8787:8787 rocker/verse I wait for a few minutes and see a downloading message, then I get a message "docker: unauthorized: authentication required."
I found this separate documentation which advised me to add a password:
docker run --rm -p 8787:8787 -e PASSWORD=blah rocker/rstudio
But I got the same result "docker: unauthorized: authentication required."
I did some Google searching and found some posts both here on SO and on Github but was unable to identify what is causing this error in my specific case.
I suspect my weak internet connection might have something to do with it since I seem to be able to download for about 10 or 15 minutes before seeing this message.
Here is Docker info:
Macs-MacBook:~ macuser$ docker info
Containers: 1
Running: 0
Paused: 0
Stopped: 1
Images: 2
Server Version: 18.09.6
Storage Driver: overlay2
Backing Filesystem: extfs
Supports d_type: true
Native Overlay Diff: true
Logging Driver: json-file
Cgroup Driver: cgroupfs
Plugins:
Volume: local
Network: bridge host macvlan null overlay
Log: awslogs fluentd gcplogs gelf journald json-file local logentries splunk syslog
Swarm: inactive
Runtimes: runc
Default Runtime: runc
Init Binary: docker-init
containerd version: bb71b10fd8f58240ca47fbb579b9d1028eea7c84
runc version: 2b18fe1d885ee5083ef9f0838fee39b62d653e30
init version: fec3683
Security Options:
seccomp
Profile: default
Kernel Version: 4.14.116-boot2docker
Operating System: Boot2Docker 18.09.6 (TCL 8.2.1)
OSType: linux
Architecture: x86_64
CPUs: 1
Total Memory: 1.951GiB
Name: default
ID: XMCE:OBLV:CKEX:EGIB:PHQ7:MLHF:ZJSA:PGYN:OIMM:JI67:ETCI:JKBH
Docker Root Dir: /mnt/sda1/var/lib/docker
Debug Mode (client): false
Debug Mode (server): false
Registry: https://index.docker.io/v1/
Labels:
provider=virtualbox
Experimental: false
Insecure Registries:
127.0.0.0/8
Live Restore Enabled: false
Does anyone know where I can look to next in order to be able to pull and or run the rocker image?

SSH connectivity issues with ntc-ansible modules

I am trying to using the ntc-ansible module with Ansible running on Ubuntu (WSL). I have ssh connectivity to my remote device (Cisco 2960X) and I can run ansible playbooks to the same remote switch using the built in Ansible networking modules (ios_command) and it works fine.
Issue:
When I try to run any of the ntc-ansible modules, it fails, unable to connect to the device. Probably something simple, but I have hit a wall. There is something I am missing about how to use ntc-ansible modules. Ansible is seeing the modules as I can look at the docs as was suggested as a test in the readme.
I have ntc-ansible module installed here: /home/melshman/.ansible/plugins/modules/ntc-ansible
I am running my playbooks from here: ~/projects/ansible/
The first time I ran the playbook with the ntc-ansible modules it failed and based on error message and some research I installed sshpass (sudo apt-get install sshpass). But still having ssh problems using ntc-ansible… (playbook and traceback below)
I hear folks taking about an index file, but I can’t find that file? Where does it live and what do I need to do with it?
What is my connection supposed to be setup to be? Local? SSH? Netmiko_ssh?
What should I be using for platform? Cisco_ios? cisco_ios_ssh?
Appreciate any help I can get. I have been running in circles for hours and hours.
Ansible Version Info:
VTMNB17024:~/projects/ansible $ ansible --version
ansible 2.5.3
config file = /home/melshman/projects/ansible/ansible.cfg
configured module search path = [u'/home/melshman/.ansible/plugins/modules', u'/usr/share/ansible/plugins/modules']
ansible python module location = /usr/local/lib/python2.7/dist-packages/ansible
executable location = /usr/local/bin/ansible
python version = 2.7.12 (default, Dec 4 2017, 14:50:18) [GCC 5.4.0 20160609]
Working playbook (ios_command:) note: ansible_ssh_pass and ansible_user in group var:
- name: Test Net Automation
hosts: ctil-ios-upgrade
connection: local
gather_facts: no
tasks:
- name: Grab run config
ios_command:
commands:
- show run
register: config
- name: Create backup of running configuration
copy:
content: "{{config.stdout[0]}}"
dest: "backups/show_run_{{inventory_hostname}}.txt"
Playbook (not working) using ntc-ansible module (Note: username and password are defined in Group VAR:
- name: Cisco IOS Automation
hosts: ctil-ios-upgrade
connection: local
gather_facts: no
tasks:
- name: GET UPTIME
ntc_show_command:
connection: ssh
platform: "cisco_ios"
command: 'show version | inc uptime'
host: "{{ inventory_hostname }}"
username: "{{ username }}"
password: "{{ password }}"
use_templates: True
template_dir: /home/melshman/.ansible/plugins/modules/ntc-ansible/ntc-templates/templates
Here is the traceback I get when the error occurs:
An exception occurred during task execution. To see the full traceback, use -vvv. The error was: netmiko.ssh_exception.NetMikoTimeoutException: Connection to device timed-out: cisco_ios VTgroup_SW:22
fatal: [VTgroup_SW]: FAILED! => {"changed": false, "module_stderr": "Traceback (most recent call last):\n File \"/tmp/ansible_RJRY9m/ansible_module_ntc_save_config.py\", line 279, in \n main()\n File \"/tmp/ansible_RJRY9m/ansible_module_ntc_save_config.py\", line 251, in main\n device = ntc_device(device_type, host, username, password, **kwargs)\n File \"/usr/local/lib/python2.7/dist-packages/pyntc-0.0.6-py2.7.egg/pyntc/__init__.py\", line 35, in ntc_device\n return device_class(*args, **kwargs)\n File \"/usr/local/lib/python2.7/dist-packages/pyntc-0.0.6-py2.7.egg/pyntc/devices/ios_device.py\", line 39, in __init__\n self.open()\n File \"/usr/local/lib/python2.7/dist-packages/pyntc-0.0.6-py2.7.egg/pyntc/devices/ios_device.py\", line 55, in open\n verbose=False)\n File \"build/bdist.linux-x86_64/egg/netmiko/ssh_dispatcher.py\", line 178, in ConnectHandler\n File \"build/bdist.linux-x86_64/egg/netmiko/base_connection.py\", line 207, in __init__\n File \"build/bdist.linux-x86_64/egg/netmiko/base_connection.py\", line 693, in establish_connection\nnetmiko.ssh_exception.NetMikoTimeoutException: Connection to device timed-out: cisco_ios VTgroup_SW:22\n", "module_stdout": "", "msg": "MODULE FAILURE", "rc": 1}
Here is a working solution using ntc_show_command to a Cisco IOS device.
- name: Cisco IOS Automation
hosts: pynet-rtr1
connection: local
gather_facts: no
tasks:
- name: GET UPTIME
ntc_show_command:
connection: ssh
platform: "cisco_ios"
command: 'show version'
host: "{{ ansible_host }}"
username: "{{ ansible_user }}"
password: "{{ ansible_ssh_pass }}"
use_templates: True
template_dir: '/home/kbyers/ntc-templates/templates'
If you are going to use ntc-templates, I probably would not have the '| include uptime' in the 'show version'. In other words, let TextFSM convert the output to structured data first and then grab the uptime from that structured data.
I modified inventory_hostname to ansible_host to be consistent with my inventory format (my inventory_hostname doesn't actually resolve in DNS).
I modified username and password to 'ansible_user' and 'ansible_ssh_pass' to be consistent with my inventory and also to be more consistent with Ansible 2.5/2.6 variable naming.
On your above issue, your exception message does not match your playbook (i.e. are you sure that is the exception you get for that playbook).
Here is my inventory file (I simplified this to remove some unnecessary devices and to hide confidential information)
[all:vars]
ansible_connection=local
ansible_python_interpreter=/home/kbyers/VENV/ansible/bin/python
ansible_user=user
ansible_ssh_pass=password
[local]
localhost ansible_connection=local
[cisco]
pynet-rtr1 ansible_host=cisco1.domain.com
pynet-rtr2 ansible_host=cisco2.domain.com

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