Error when installing package "plotly" in R - r

When I tried to install the package "plotly", it returned the following error message:
* installing *source* package ‘data.table’ ...
** package ‘data.table’ successfully unpacked and MD5 sums checked
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c assign.c -o assign.o
clang: error: unsupported option '-fopenmp'
make: *** [assign.o] Error 1
ERROR: compilation failed for package ‘data.table’
* removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/data.table’
Warning in install.packages :
installation of package ‘data.table’ had non-zero exit status
ERROR: dependency ‘data.table’ is not available for package ‘plotly’
* removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/plotly’
Warning in install.packages :
installation of package ‘plotly’ had non-zero exit status
After some quick search this seems to be due to an incompatibility with MacOS High Sierra? I was able to install other packages like 'ggplot2' though. I'm very new to R and would really appreciate any help!

The non-zero exit status simply indicates that there was an error during the installation of the "package".
File link : https://cran.r-project.org/src/contrib/plotly_4.8.0.tar.gz
Try with the following command:
install.packages('FILE_PATH', repos=NULL, type = "source",dependencies = TRUE)
Doing so, all the dependencies for the package will also be downloaded. Downloading from source will recompile the package and installs.

Related

R can't install packages, gcc and g++ fatal error

I haven't been able to install any packages (such as randomForest, devtools, etc.)
I have also updated my R to 4.2 recently (not sure if they are related). I am also running Ubuntu.
I suspect it was something to do with the C++ compiler, such as the g++ and GCC.
things that I have done:
I have edit the Makevars to include:
CC=/usr/bin/gcc
CXX=/usr/bin/g++
FC=/usr/bin/gfortran
F77=/usr/bin/gfortran
Is there anyone facing the same problem? or any hints and guidance are really appreciated. Thank you in advance. If you need more information, please kindly let me know.
One of the errors is (installing devtools):
* installing *source* package ‘sourcetools’ ...
** package ‘sourcetools’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Reader.cpp -o Reader.o
g++: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:177: Reader.o] Error 1
ERROR: compilation failed for package ‘sourcetools’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/sourcetools’
Warning in install.packages :
installation of package ‘sourcetools’ had non-zero exit status
* installing *source* package ‘systemfonts’ ...
** package ‘systemfonts’ successfully unpacked and MD5 sums checked
** using staged installation
Package fontconfig was not found in the pkg-config search path.
Perhaps you should add the directory containing `fontconfig.pc'
to the PKG_CONFIG_PATH environment variable
No package 'fontconfig' found
Package freetype2 was not found in the pkg-config search path.
Perhaps you should add the directory containing `freetype2.pc'
to the PKG_CONFIG_PATH environment variable
No package 'freetype2' found
Using PKG_CFLAGS=
Using PKG_LIBS=-lfontconfig -lfreetype
--------------------------- [ANTICONF] --------------------------------
Configuration failed to find the fontconfig freetype2 library. Try installing:
* deb: libfontconfig1-dev (Debian, Ubuntu, etc)
* rpm: fontconfig-devel (Fedora, EPEL)
* csw: fontconfig_dev (Solaris)
* brew: freetype (OSX)
If fontconfig freetype2 is already installed, check that 'pkg-config' is in your
PATH and PKG_CONFIG_PATH contains a fontconfig freetype2.pc file. If pkg-config
is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
-------------------------- [ERROR MESSAGE] ---------------------------
<stdin>:1:10: fatal error: fontconfig/fontconfig.h: No such file or directory
compilation terminated.
--------------------------------------------------------------------
ERROR: configuration failed for package ‘systemfonts’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/systemfonts’
Warning in install.packages :
installation of package ‘systemfonts’ had non-zero exit status
* installing *source* package ‘gert’ ...
** package ‘gert’ successfully unpacked and MD5 sums checked
** using staged installation
> curl::curl_download("https://r-lib.github.io/gert/get-libgit2-linux.sh","get-libgit2-linux.sh")
>
>
Using static libgit2-1.1.0 for Linux x86_64
Using PKG_CFLAGS=-DSTATIC_LIBGIT2 -I/tmp/RtmpNHz5pp/R.INSTALL48c6b475a68c2/gert/libgit2/include
Using PKG_LIBS=-L/tmp/RtmpNHz5pp/R.INSTALL48c6b475a68c2/gert/libgit2/lib -lgit2 -lrt -lpthread -lssh2 -lssl -lcrypto -ldl -lpcre -lz
Configuration OK!
** libs
rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o
gcc -I"/usr/share/R/include" -DNDEBUG -DSTATIC_LIBGIT2 -I/tmp/RtmpNHz5pp/R.INSTALL48c6b475a68c2/gert/libgit2/include -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c branch.c -o branch.o
gcc: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:168: branch.o] Error 1
ERROR: compilation failed for package ‘gert’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/gert’
Warning in install.packages :
installation of package ‘gert’ had non-zero exit status
* installing *source* package ‘commonmark’ ...
** package ‘commonmark’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions/tasklist.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a
gcc -I"/usr/share/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c extensions.c -o extensions.o
gcc: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:168: extensions.o] Error 1
ERROR: compilation failed for package ‘commonmark’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/commonmark’
Warning in install.packages :
installation of package ‘commonmark’ had non-zero exit status
* installing *source* package ‘profvis’ ...
** package ‘profvis’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pause.c -o pause.o
gcc: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:168: pause.o] Error 1
ERROR: compilation failed for package ‘profvis’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/profvis’
Warning in install.packages :
installation of package ‘profvis’ had non-zero exit status
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -I"/usr/share/R/include" -DNDEBUG -I./rlang/ -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c capture.c -o capture.o
gcc: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:168: capture.o] Error 1
ERROR: compilation failed for package ‘rlang’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/rlang’
* restoring previous ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/rlang’
Warning in install.packages :
installation of package ‘rlang’ had non-zero exit status
* installing *source* package ‘later’ ...
** package ‘later’ successfully unpacked and MD5 sums checked
** using staged installation
Running configure script
-latomic linker flag needed.
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RcppExports.cpp -o RcppExports.o
g++: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:177: RcppExports.o] Error 1
ERROR: compilation failed for package ‘later’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/later’
Warning in install.packages :
installation of package ‘later’ had non-zero exit status
ERROR: dependency ‘systemfonts’ is not available for package ‘textshaping’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/textshaping’
Warning in install.packages :
installation of package ‘textshaping’ had non-zero exit status
* installing *source* package ‘cachem’ ...
** package ‘cachem’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-asoVQd/r-base-4.2.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cache.c -o cache.o
gcc: fatal error: cannot execute ‘as’: execvp: No such file or directory
compilation terminated.
make: *** [/usr/lib/R/etc/Makeconf:168: cache.o] Error 1
ERROR: compilation failed for package ‘cachem’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/cachem’
Warning in install.packages :
installation of package ‘cachem’ had non-zero exit status
ERROR: dependency ‘gert’ is not available for package ‘usethis’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/usethis’
Warning in install.packages :
installation of package ‘usethis’ had non-zero exit status
* installing *source* package ‘pkgload’ ...
** package ‘pkgload’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
namespace ‘rlang’ 1.0.2 is being loaded, but >= 1.0.3 is required
Calls: <Anonymous> ... withCallingHandlers -> loadNamespace -> namespaceImport -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘pkgload’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/pkgload’
* restoring previous ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/pkgload’
Warning in install.packages :
installation of package ‘pkgload’ had non-zero exit status
ERROR: dependency ‘later’ is not available for package ‘promises’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/promises’
Warning in install.packages :
installation of package ‘promises’ had non-zero exit status
ERROR: dependencies ‘systemfonts’, ‘textshaping’ are not available for package ‘ragg’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/ragg’
Warning in install.packages :
installation of package ‘ragg’ had non-zero exit status
ERROR: dependency ‘cachem’ is not available for package ‘memoise’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/memoise’
Warning in install.packages :
installation of package ‘memoise’ had non-zero exit status
ERROR: dependency ‘commonmark’ is not available for package ‘roxygen2’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/roxygen2’
Warning in install.packages :
installation of package ‘roxygen2’ had non-zero exit status
ERROR: dependencies ‘promises’, ‘later’ are not available for package ‘httpuv’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/httpuv’
Warning in install.packages :
installation of package ‘httpuv’ had non-zero exit status
ERROR: dependency ‘memoise’ is not available for package ‘downlit’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/downlit’
Warning in install.packages :
installation of package ‘downlit’ had non-zero exit status
ERROR: dependencies ‘httpuv’, ‘sourcetools’, ‘later’, ‘promises’, ‘commonmark’, ‘cachem’ are not available for package ‘shiny’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/shiny’
Warning in install.packages :
installation of package ‘shiny’ had non-zero exit status
ERROR: dependencies ‘downlit’, ‘memoise’, ‘ragg’ are not available for package ‘pkgdown’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/pkgdown’
Warning in install.packages :
installation of package ‘pkgdown’ had non-zero exit status
ERROR: dependency ‘shiny’ is not available for package ‘miniUI’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/miniUI’
Warning in install.packages :
installation of package ‘miniUI’ had non-zero exit status
ERROR: dependencies ‘usethis’, ‘memoise’, ‘miniUI’, ‘pkgdown’, ‘profvis’, ‘roxygen2’ are not available for package ‘devtools’
* removing ‘/home/cindy/R/x86_64-pc-linux-gnu-library/4.2/devtools’
Warning in install.packages :
installation of package ‘devtools’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpITL0q0/downloaded_packages’

RStudio learnr package error "ERROR: compilation failed for package 'backports'"

First question on StackOverflow. I will try to be clear.
I just installed
R 4.0.1 for Windows 10
RStudio (RStudio 1.3.959) for Windows 10
I tried to install learnr package, which required many other packages. The console prints toward the end:
installing source package 'backports' ...
** package 'backports' successfully unpacked and MD5 sums checked
** using staged installation
** libs
"c:/rtools40/mingw64/bin/"gcc -I"C:/PROGRA~1/R/R-40~1.1/include" -DNDEBUG -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c dotsElt.c -o dotsElt.o
/bin/sh: c:/rtools40/mingw64/bin/gcc: No such file or directory
make: *** [dotsElt.o] Error 127
ERROR: compilation failed for package 'backports'
removing 'C:/Users/micha/Documents/R/win-library/4.0/backports'
Warning in install.packages :
installation of package ‘backports’ had non-zero exit status
installing source package 'isoband' ...
** package 'isoband' successfully unpacked and MD5 sums checked
** using staged installation
** libs
"c:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-40~1.1/include" -DNDEBUG -I'C:/Users/micha/Documents/R/win-library/4.0/testthat/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c clip-lines.cpp -o clip-lines.o
/bin/sh: c:/rtools40/mingw64/bin/g++: No such file or directory
make: *** [clip-lines.o] Error 127
ERROR: compilation failed for package 'isoband'
removing 'C:/Users/micha/Documents/R/win-library/4.0/isoband'
Warning in install.packages :
installation of package ‘isoband’ had non-zero exit status
ERROR: dependency 'isoband' is not available for package 'ggplot2'
removing 'C:/Users/micha/Documents/R/win-library/4.0/ggplot2'
Warning in install.packages :
installation of package ‘ggplot2’ had non-zero exit status
Is it an internal issue, or a problem with the packages? Should I contact the package maintainer for 'backports', 'isoband', 'ggplot2', re-install R and/or RStudio, or something else?
It seems that you run that on Windows and want to install learnr from the source (it means that you have to compile these packages). However, some packages need additional tools to compile on Windows. These tools are provided in official RTools for Windows, so install that first and try again.
And sometimes you can install the binary versions of the packages rather than the source. Then you don't need to compile:
install.packages("learnr", type = "binary")

Problems to install zoo package, Error: sh: c:/Rtools/mingw_32/bin/gcc: No such file or directory

I tried to install the zoo package via the R package installer:
install.packages("C:/Users/srues/Downloads/zoo_1.8-8.tar.gz", repos = NULL, type = "source")
but I get the following error
Installing package into ‘C:/Users/srues/Documents/R/win-library/3.6’
(as ‘lib’ is unspecified)
* installing *source* package 'zoo' ...
** Paket 'zoo' erfolgreich entpackt und MD5 Summen überprüft
** using staged installation
** libs
*** arch - i386
c:/Rtools/mingw_32/bin/gcc -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I../inst/include -O3 -Wall -std=gnu99 -mtune=generic -c coredata.c -o coredata.o
sh: c:/Rtools/mingw_32/bin/gcc: No such file or directory
make: *** [C:/PROGRA~1/R/R-36~1.1/etc/i386/Makeconf:208: coredata.o] Error 127
ERROR: compilation failed for package 'zoo'
* removing 'C:/Users/srues/Documents/R/win-library/3.6/zoo'
* restoring previous 'C:/Users/srues/Documents/R/win-library/3.6/zoo'
Warning in install.packages :
installation of package ‘C:/Users/srues/Downloads/zoo_1.8-8.tar.gz’ had non-zero exit status
the line
sh: c:/Rtools/mingw_32/bin/gcc: No such file or directory
says it miss the directory or file. What I have to do to find this file or directory? Or can I install the zoo package over Rtool40?

error while installing quadprog package in R for MAC

I'm trying to install the quadprog package in R in mac but it keeps showing this massage:
installing source package ‘quadprog’ ...
** package ‘quadprog’ successfully unpacked and MD5 sums checked
** libs
gfortran-4.8 -fPIC -g -O2 -c aind.f -o aind.o
make: gfortran-4.8: No such file or directory
make: *** [aind.o] Error 1
ERROR: compilation failed for package ‘quadprog’
removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/quadprog’
Anybody know what I should do to have it installed?

semPlot package dependency issues

I am trying to use the package semPlot with R version 3.2.3 on Linux Mint. Is the only solution to downgrade my R-version? I have installed package XML without errors. UPDATE BELOW
ran: install.packages("semPlot",dependencies=T) errors:
....
g++ -I/usr/share/R/include -DNDEBUG -I"/home/king/R/x86_64-pc-linux-gnu-library/3.2/Rcpp/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c minqa.cpp -o minqa.o
/bin/bash: g++: command not found
make: *** [minqa.o] Error 127
ERROR: compilation failed for package ‘minqa’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/minqa’
Warning in install.packages :
installation of package ‘minqa’ had non-zero exit status
* installing *source* package ‘nloptr’ ...
** package ‘nloptr’ successfully unpacked and MD5 sums checked
checking for g++... no
checking for c++... no
checking for gpp... no
checking for aCC... no
checking for CC... no
checking for cxx... no
checking for cc++... no
checking for cl.exe... no
checking for FCC... no
checking for KCC... no
checking for RCC... no
checking for xlC_r... no
checking for xlC... no
checking whether the C++ compiler works... no
configure: error: in `/tmp/Rtmpw7bRnY/R.INSTALL5fd12b68373/nloptr':
configure: error: C++ compiler cannot create executables
See `config.log' for more details
ERROR: configuration failed for package ‘nloptr’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/nloptr’
Warning in install.packages :
installation of package ‘nloptr’ had non-zero exit status
* installing *source* package ‘RcppEigen’ ...
** package ‘RcppEigen’ successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/share/R/include -DNDEBUG -I"/home/king/R/x86_64-pc-linux-gnu-library/3.2/Rcpp/include" -I../inst/include -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RcppEigen.cpp -o RcppEigen.o
/bin/bash: g++: command not found
make: *** [RcppEigen.o] Error 127
ERROR: compilation failed for package ‘RcppEigen’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/RcppEigen’
Warning in install.packages :
installation of package ‘RcppEigen’ had non-zero exit status
ERROR: dependencies ‘minqa’, ‘nloptr’, ‘RcppEigen’ are not available for package ‘lme4’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/lme4’
Warning in install.packages :
installation of package ‘lme4’ had non-zero exit status
ERROR: dependency ‘lme4’ is not available for package ‘arm’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/arm’
Warning in install.packages :
installation of package ‘arm’ had non-zero exit status
ERROR: dependency ‘lme4’ is not available for package ‘rockchalk’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/rockchalk’
Warning in install.packages :
installation of package ‘rockchalk’ had non-zero exit status
ERROR: dependency ‘arm’ is not available for package ‘mi’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/mi’
Warning in install.packages :
installation of package ‘mi’ had non-zero exit status
ERROR: dependency ‘mi’ is not available for package ‘sem’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/sem’
Warning in install.packages :
installation of package ‘sem’ had non-zero exit status
ERROR: dependency ‘sem’ is not available for package ‘qgraph’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/qgraph’
Warning in install.packages :
installation of package ‘qgraph’ had non-zero exit status
ERROR: dependencies ‘qgraph’, ‘sem’, ‘rockchalk’ are not available for package ‘semPlot’
* removing ‘/home/king/R/x86_64-pc-linux-gnu-library/3.2/semPlot’
Warning in install.packages :
installation of package ‘semPlot’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpW1PZ2x/downloaded_packages’
UPDATE
Based on the comments I discovered I had to install:
sudo apt-get install gcc
sudo apt-get install g++
sudo apt-get install build-essential
I am now getting:
/usr/bin/ld: cannot find -llapack
/usr/bin/ld: cannot find -lblas
collect2: error: ld returned 1 exit status
Thanks again to the comments I discovered I had to install:
sudo apt-get install liblapack-dev
which finally fixed my issues and I was able to install the package

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