Related
I would love to know if building something like this is possible is RShiny. I have experience with interactive plots/charts using plotly, ggplot and ggplotly but I can't see how to do something like this. I love how the graph engages the user to make a guess and then shows the real data.
If anyone could please point me in the direction of any documentation I will be forever grateful!
https://www.mathematica-mpr.com/dataviz/race-to-the-top
Here is a Shiny implementation of this jsfiddle.
library(shiny)
library(jsonlite)
barChartInput <- function(inputId, width = "100%", height = "400px",
data, category, value, minValue, maxValue,
color = "rgb(208,32,144)"){
tags$div(id = inputId, class = "amchart",
style = sprintf("width: %s; height: %s;", width, height),
`data-data` = as.character(toJSON(data)),
`data-category` = category,
`data-value` = value,
`data-min` = minValue,
`data-max` = maxValue,
`data-color` = color)
}
dat <- data.frame(
country = c("USA", "China", "Japan", "Germany", "UK", "France"),
visits = c(3025, 1882, 1809, 1322, 1122, 1114)
)
ui <- fluidPage(
tags$head(
tags$script(src = "http://www.amcharts.com/lib/4/core.js"),
tags$script(src = "http://www.amcharts.com/lib/4/charts.js"),
tags$script(src = "http://www.amcharts.com/lib/4/themes/animated.js"),
tags$script(src = "barchartBinding.js")
),
fluidRow(
column(8,
barChartInput("mybarchart", data = dat,
category = "country", value = "visits",
minValue = 0, maxValue = 3500)),
column(4,
tags$label("Data:"),
verbatimTextOutput("data"),
br(),
tags$label("Change:"),
verbatimTextOutput("change"))
)
)
server <- function(input, output){
output[["data"]] <- renderPrint({
if(is.null(input[["mybarchart"]])){
dat
}else{
fromJSON(input[["mybarchart"]])
}
})
output[["change"]] <- renderPrint({ input[["mybarchart_change"]] })
}
shinyApp(ui, server)
The file barchartBinding.js, to put in the www subfolder of the app file:
var barchartBinding = new Shiny.InputBinding();
$.extend(barchartBinding, {
find: function (scope) {
return $(scope).find(".amchart");
},
getValue: function (el) {
return null;
},
subscribe: function (el, callback) {
$(el).on("change.barchartBinding", function (e) {
callback();
});
},
unsubscribe: function (el) {
$(el).off(".barchartBinding");
},
initialize: function (el) {
var id = el.getAttribute("id");
var $el = $(el);
var data = $el.data("data");
var dataCopy = $el.data("data");
var categoryName = $el.data("category");
var valueName = $el.data("value");
var minValue = $el.data("min");
var maxValue = $el.data("max");
var barColor = $el.data("color");
am4core.useTheme(am4themes_animated);
var chart = am4core.create(id, am4charts.XYChart);
chart.hiddenState.properties.opacity = 0; // this makes initial fade in effect
chart.data = data;
chart.padding(40, 40, 0, 0);
chart.maskBullets = false; // allow bullets to go out of plot area
var text = chart.plotContainer.createChild(am4core.Label);
text.text = "Drag column bullet to change its value";
text.y = 92;
text.x = am4core.percent(100);
text.horizontalCenter = "right";
text.zIndex = 100;
text.fillOpacity = 0.7;
// category axis
var categoryAxis = chart.xAxes.push(new am4charts.CategoryAxis());
categoryAxis.title.text = categoryName;
categoryAxis.title.fontWeight = "bold";
categoryAxis.dataFields.category = categoryName;
categoryAxis.renderer.grid.template.disabled = true;
categoryAxis.renderer.minGridDistance = 50;
// value axis
var valueAxis = chart.yAxes.push(new am4charts.ValueAxis());
valueAxis.title.text = valueName;
valueAxis.title.fontWeight = "bold";
// we set fixed min/max and strictMinMax to true, as otherwise value axis will adjust min/max while dragging and it won't look smooth
valueAxis.strictMinMax = true;
valueAxis.min = minValue;
valueAxis.max = maxValue;
valueAxis.renderer.minWidth = 60;
// series
var series = chart.series.push(new am4charts.ColumnSeries());
series.dataFields.categoryX = categoryName;
series.dataFields.valueY = valueName;
series.tooltip.pointerOrientation = "vertical";
series.tooltip.dy = -8;
series.sequencedInterpolation = true;
series.defaultState.interpolationDuration = 1500;
series.columns.template.strokeOpacity = 0;
// label bullet
var labelBullet = new am4charts.LabelBullet();
series.bullets.push(labelBullet);
labelBullet.label.text = "{valueY.value.formatNumber('#.')}";
labelBullet.strokeOpacity = 0;
labelBullet.stroke = am4core.color("#dadada");
labelBullet.dy = -20;
// series bullet
var bullet = series.bullets.create();
bullet.stroke = am4core.color("#ffffff");
bullet.strokeWidth = 3;
bullet.opacity = 0; // initially invisible
bullet.defaultState.properties.opacity = 0;
// resize cursor when over
bullet.cursorOverStyle = am4core.MouseCursorStyle.verticalResize;
bullet.draggable = true;
// create hover state
var hoverState = bullet.states.create("hover");
hoverState.properties.opacity = 1; // visible when hovered
// add circle sprite to bullet
var circle = bullet.createChild(am4core.Circle);
circle.radius = 8;
// while dragging
bullet.events.on("drag", event => {
handleDrag(event);
});
bullet.events.on("dragstop", event => {
handleDrag(event);
var dataItem = event.target.dataItem;
dataItem.column.isHover = false;
event.target.isHover = false;
dataCopy[dataItem.index][valueName] = dataItem.values.valueY.value;
Shiny.setInputValue(id, JSON.stringify(dataCopy));
Shiny.setInputValue(id + "_change", {
index: dataItem.index,
category: dataItem.categoryX,
value: dataItem.values.valueY.value
});
});
function handleDrag(event) {
var dataItem = event.target.dataItem;
// convert coordinate to value
var value = valueAxis.yToValue(event.target.pixelY);
// set new value
dataItem.valueY = value;
// make column hover
dataItem.column.isHover = true;
// hide tooltip not to interrupt
dataItem.column.hideTooltip(0);
// make bullet hovered (as it might hide if mouse moves away)
event.target.isHover = true;
}
// column template
var columnTemplate = series.columns.template;
columnTemplate.column.cornerRadiusTopLeft = 8;
columnTemplate.column.cornerRadiusTopRight = 8;
columnTemplate.fillOpacity = 0.8;
columnTemplate.tooltipText = "drag me";
columnTemplate.tooltipY = 0; // otherwise will point to middle of the column
// hover state
var columnHoverState = columnTemplate.column.states.create("hover");
columnHoverState.properties.fillOpacity = 1;
// you can change any property on hover state and it will be animated
columnHoverState.properties.cornerRadiusTopLeft = 35;
columnHoverState.properties.cornerRadiusTopRight = 35;
// show bullet when hovered
columnTemplate.events.on("over", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
itemBullet.isHover = true;
});
// hide bullet when mouse is out
columnTemplate.events.on("out", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
itemBullet.isHover = false;
});
// start dragging bullet even if we hit on column not just a bullet, this will make it more friendly for touch devices
columnTemplate.events.on("down", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
itemBullet.dragStart(event.pointer);
});
// when columns position changes, adjust minX/maxX of bullets so that we could only dragg vertically
columnTemplate.events.on("positionchanged", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
var column = dataItem.column;
itemBullet.minX = column.pixelX + column.pixelWidth / 2;
itemBullet.maxX = itemBullet.minX;
itemBullet.minY = 0;
itemBullet.maxY = chart.seriesContainer.pixelHeight;
});
// as by default columns of the same series are of the same color, we add adapter which takes colors from chart.colors color set
columnTemplate.adapter.add("fill", (fill, target) => {
return barColor; //chart.colors.getIndex(target.dataItem.index).saturate(0.3);
});
bullet.adapter.add("fill", (fill, target) => {
return chart.colors.getIndex(target.dataItem.index).saturate(0.3);
});
}
});
Shiny.inputBindings.register(barchartBinding);
Update
And below is a Shiny implementation of the amcharts4 grouped bar chart.
library(shiny)
library(jsonlite)
registerInputHandler("dataframe", function(data, ...) {
fromJSON(toJSON(data, auto_unbox = TRUE))
}, force = TRUE)
groupedBarChartInput <- function(inputId, width = "100%", height = "400px",
data, categoryField, valueFields,
minValue, maxValue,
ndecimals = 0,
colors = NULL,
categoryLabel = categoryField,
valueLabels = valueFields,
categoryAxisTitle = categoryLabel,
valueAxisTitle = NULL,
categoryAxisTitleFontSize = 22,
valueAxisTitleFontSize = 22,
categoryAxisTitleColor = "indigo",
valueAxisTitleColor = "indigo",
draggable = rep(FALSE, length(valueFields))){
tags$div(id = inputId, class = "amGroupedBarChart",
style = sprintf("width: %s; height: %s;", width, height),
`data-data` = as.character(toJSON(data)),
`data-categoryfield` = categoryField,
`data-valuefields` = as.character(toJSON(valueFields)),
`data-min` = minValue,
`data-max` = maxValue,
`data-ndecimals` = ndecimals,
`data-colors` = ifelse(is.null(colors), "auto", as.character(toJSON(colors))),
`data-valuenames` = as.character(toJSON(valueLabels)),
`data-categoryname` = categoryLabel,
`data-categoryaxistitle` = categoryAxisTitle,
`data-valueaxistitle` = valueAxisTitle,
`data-draggable` = as.character(toJSON(draggable)),
`data-categoryaxistitlefontsize` = categoryAxisTitleFontSize,
`data-valueaxistitlefontsize` = valueAxisTitleFontSize,
`data-categoryaxistitlecolor` = categoryAxisTitleColor,
`data-valueaxistitlecolor` = valueAxisTitleColor)
}
set.seed(666)
dat <- data.frame(
year = rpois(5, 2010),
income = rpois(5, 25),
expenses = rpois(5, 20)
)
ui <- fluidPage(
tags$head(
tags$script(src = "http://www.amcharts.com/lib/4/core.js"),
tags$script(src = "http://www.amcharts.com/lib/4/charts.js"),
tags$script(src = "http://www.amcharts.com/lib/4/themes/animated.js"),
tags$script(src = "groupedBarChartBinding.js")
),
fluidRow(
column(8,
groupedBarChartInput("mybarchart", data = dat[order(dat$year),],
categoryField = "year",
valueFields = c("income", "expenses"),
categoryLabel = "Year",
valueLabels = c("Income", "Expenses"),
valueAxisTitle = "Income and expenses",
minValue = 0, maxValue = 35,
draggable = c(FALSE, TRUE),
colors = c("darkmagenta","darkred"))),
column(4,
tags$label("Data:"),
verbatimTextOutput("data"),
br(),
tags$label("Change:"),
verbatimTextOutput("change"))
)
)
server <- function(input, output){
output[["data"]] <- renderPrint({
input[["mybarchart"]]
})
output[["change"]] <- renderPrint({ input[["mybarchart_change"]] })
}
shinyApp(ui, server)
The file groupedBarChartBinding.js, to put in the www subfolder:
var groupedBarChartBinding = new Shiny.InputBinding();
$.extend(groupedBarChartBinding, {
find: function(scope) {
return $(scope).find(".amGroupedBarChart");
},
getValue: function(el) {
return $(el).data("data");
},
getType: function(el) {
return "dataframe";
},
subscribe: function(el, callback) {
$(el).on("change.groupedBarChartBinding", function(e) {
callback();
});
},
unsubscribe: function(el) {
$(el).off(".groupedBarChartBinding");
},
initialize: function(el) {
var id = el.getAttribute("id");
var $el = $(el);
var data = $el.data("data");
var dataCopy = $el.data("data");
var categoryField = $el.data("categoryfield");
var valueFields = $el.data("valuefields");
var minValue = $el.data("min");
var maxValue = $el.data("max");
var colors = $el.data("colors");
var valueNames = $el.data("valuenames");
var categoryName = $el.data("categoryname");
var categoryAxisTitle = $el.data("categoryaxistitle");
var valueAxisTitle = $el.data("valueaxistitle");
var draggable = $el.data("draggable");
var ndecimals = $el.data("ndecimals");
var numberFormat = "#.";
for (var i = 0; i < ndecimals; i++) {
numberFormat = numberFormat + "#";
}
var categoryAxisTitleFontSize = $el.data("categoryaxistitlefontsize") + "px";
var valueAxisTitleFontSize = $el.data("valueaxistitlefontsize") + "px";
var categoryAxisTitleColor = $el.data("categoryaxistitlecolor");
var valueAxisTitleColor = $el.data("valueaxistitlecolor");
am4core.useTheme(am4themes_animated);
var chart = am4core.create(id, am4charts.XYChart);
chart.hiddenState.properties.opacity = 0; // this makes initial fade in effect
chart.data = data;
chart.padding(40, 40, 40, 40);
chart.maskBullets = false; // allow bullets to go out of plot area
// Create axes
var categoryAxis = chart.yAxes.push(new am4charts.CategoryAxis());
categoryAxis.dataFields.category = categoryField;
categoryAxis.numberFormatter.numberFormat = numberFormat;
categoryAxis.renderer.inversed = true;
categoryAxis.renderer.grid.template.location = 0;
categoryAxis.renderer.cellStartLocation = 0.1;
categoryAxis.renderer.cellEndLocation = 0.9;
categoryAxis.title.text = categoryAxisTitle;
categoryAxis.title.fontWeight = "bold";
categoryAxis.title.fontSize = categoryAxisTitleFontSize;
categoryAxis.title.setFill(categoryAxisTitleColor);
var valueAxis = chart.xAxes.push(new am4charts.ValueAxis());
valueAxis.renderer.opposite = true;
valueAxis.strictMinMax = true;
valueAxis.min = minValue;
valueAxis.max = maxValue;
if (valueAxisTitle !== null) {
valueAxis.title.text = valueAxisTitle;
valueAxis.title.fontWeight = "bold";
valueAxis.title.fontSize = valueAxisTitleFontSize;
valueAxis.title.setFill(valueAxisTitleColor);
}
function handleDrag(event) {
var dataItem = event.target.dataItem;
// convert coordinate to value
var value = valueAxis.xToValue(event.target.pixelX);
// set new value
dataItem.valueX = value;
// make column hover
dataItem.column.isHover = true;
// hide tooltip not to interrupt
dataItem.column.hideTooltip(0);
// make bullet hovered (as it might hide if mouse moves away)
event.target.isHover = true;
}
// Create series
function createSeries(field, name, barColor, drag) {
var series = chart.series.push(new am4charts.ColumnSeries());
series.dataFields.valueX = field;
series.dataFields.categoryY = categoryField;
series.name = name;
series.sequencedInterpolation = true;
var valueLabel = series.bullets.push(new am4charts.LabelBullet());
valueLabel.label.text = "{valueX}";
valueLabel.label.horizontalCenter = "left";
valueLabel.label.dx = 10;
valueLabel.label.hideOversized = false;
valueLabel.label.truncate = false;
var categoryLabel = series.bullets.push(new am4charts.LabelBullet());
categoryLabel.label.text = "{name}";
categoryLabel.label.horizontalCenter = "right";
categoryLabel.label.dx = -10;
categoryLabel.label.fill = am4core.color("#fff");
categoryLabel.label.hideOversized = false;
categoryLabel.label.truncate = false;
// column template
var columnTemplate = series.columns.template;
console.log(columnTemplate);
// columnTemplate.tooltipText = "{name}: [bold]{valueX}[/]";
columnTemplate.tooltipHTML =
"<div style='font-size:9px'>" + "{name}" + ": " + "<b>{valueX}</b>" + "</div>";
columnTemplate.height = am4core.percent(100);
columnTemplate.column.cornerRadiusBottomRight = 8;
columnTemplate.column.cornerRadiusTopRight = 8;
columnTemplate.fillOpacity = 1;
columnTemplate.tooltipX = 0; // otherwise will point to middle of the column
// hover state
var columnHoverState = columnTemplate.column.states.create("hover");
columnHoverState.properties.fillOpacity = 1;
// you can change any property on hover state and it will be animated
columnHoverState.properties.cornerRadiusBottomRight = 35;
columnHoverState.properties.cornerRadiusTopRight = 35;
// color
if (barColor !== false) {
columnTemplate.adapter.add("fill", (fill, target) => {
return barColor;
});
}
if (drag) {
// series bullet
var bullet = series.bullets.create();
bullet.stroke = am4core.color("#ffffff");
bullet.strokeWidth = 1;
bullet.opacity = 0; // initially invisible
bullet.defaultState.properties.opacity = 0;
// resize cursor when over
bullet.cursorOverStyle = am4core.MouseCursorStyle.horizontalResize;
bullet.draggable = true;
// create hover state
var hoverState = bullet.states.create("hover");
hoverState.properties.opacity = 1; // visible when hovered
// add circle sprite to bullet
var circle = bullet.createChild(am4core.Circle);
circle.radius = 5;
// dragging
// while dragging
bullet.events.on("drag", event => {
handleDrag(event);
});
bullet.events.on("dragstop", event => {
handleDrag(event);
var dataItem = event.target.dataItem;
dataItem.column.isHover = false;
event.target.isHover = false;
dataCopy[dataItem.index][field] = dataItem.values.valueX.value;
Shiny.setInputValue(id + ":dataframe", dataCopy);
Shiny.setInputValue(id + "_change", {
index: dataItem.index,
field: field,
category: dataItem.categoryY,
value: dataItem.values.valueX.value
});
});
// bullet color
if (barColor !== false) {
bullet.adapter.add("fill", (fill, target) => {
return barColor;
});
}
// show bullet when hovered
columnTemplate.events.on("over", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
itemBullet.isHover = true;
});
// hide bullet when mouse is out
columnTemplate.events.on("out", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
itemBullet.isHover = false;
});
// start dragging bullet even if we hit on column not just a bullet, this will make it more friendly for touch devices
columnTemplate.events.on("down", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
itemBullet.dragStart(event.pointer);
});
// when columns position changes, adjust minY/maxY of bullets so that we could only dragg horizontally
columnTemplate.events.on("positionchanged", event => {
var dataItem = event.target.dataItem;
var itemBullet = dataItem.bullets.getKey(bullet.uid);
var column = dataItem.column;
itemBullet.minY = column.pixelY + column.pixelHeight / 2;
itemBullet.maxY = itemBullet.minY;
itemBullet.minX = 0;
itemBullet.maxX = chart.seriesContainer.pixelWidth;
});
}
}
for (var i = 0; i < valueFields.length; i++) {
var color = colors === "auto" ? null : colors[i];
createSeries(valueFields[i], valueNames[i], color, draggable[i]);
}
}
});
Shiny.inputBindings.register(groupedBarChartBinding);
Update 2
I have done a package now : shinyAmBarCharts. I have added a button (optional) allowing to update the data to another dataset. This fulfills the OP's desideratum:
the graph engages the user to make a guess and then shows the real
data
library(shiny)
library(shinyAmBarCharts)
# create a dataset
set.seed(666)
df0 <- data.frame(
species = rep(c("sorgho","poacee","banana"), each = 3),
condition = rep(c("normal", "stress", "Nitrogen"), 3),
value = rpois(9, 10)
)
df1 <- df0; df1[["value"]] <- 10
dat <- tidyr::spread(df0, condition, value) # true data
dat2 <- tidyr::spread(df1, condition, value) # data template
# grouped bar chart
ui <- fluidPage(
br(),
fluidRow(
column(9,
amBarChart(
"mygroupedbarchart", data = dat2, data2 = dat, height = "400px",
category = "species", value = c("normal", "stress", "Nitrogen"),
valueNames = c("Normal", "Stress", "Nitrogen"),
minValue = 0, maxValue = 20,
draggable = c(TRUE, TRUE, TRUE),
theme = "dark", backgroundColor = "#30303d",
columnStyle = list(fill = c("darkmagenta", "darkred", "gold"),
stroke = "#cccccc",
cornerRadius = 4),
chartTitle = list(text = "Grouped bar chart",
fontSize = 23,
color = "firebrick"),
xAxis = list(title = list(text = "Species",
fontSize = 21,
color = "silver"),
labels = list(color = "whitesmoke",
fontSize = 17)),
yAxis = list(title = list(text = "Value",
fontSize = 21,
color = "silver"),
labels = list(color = "whitesmoke",
fontSize = 14)),
columnWidth = 90,
button = list(text = "Show true data"),
caption = list(text = "[font-style:italic]shinyAmBarCharts[/]",
color = "yellow"),
gridLines = list(color = "whitesmoke",
opacity = 0.4,
width = 1),
tooltip = list(text = "[bold;font-style:italic]{name}: {valueY}[/]",
labelColor = "#101010",
backgroundColor = "cyan",
backgroundOpacity = 0.7)
)
),
column(3,
tags$label("Data:"),
verbatimTextOutput("data"),
br(),
tags$label("Change:"),
verbatimTextOutput("change"))
)
)
server <- function(input, output){
output[["data"]] <- renderPrint({
input[["mygroupedbarchart"]]
})
output[["change"]] <- renderPrint({ input[["mygroupedbarchart_change"]] })
}
shinyApp(ui, server)
I'm trying to add a custom animation using highcharter R package like in this example where I use a polar chart.
I'm able to do this using JS, but I can't translate the animation function (from ease repository) to highcharter.
Here is my R code:
# I've tried to created a function using `JS`:
easeOutBounce <- JS("function (pos) {
if ((pos) < (1 / 2.75)) {
return (7.5625 * pos * pos);
}
if (pos < (2 / 2.75)) {
return (7.5625 * (pos -= (1.5 / 2.75)) * pos + 0.75);
}
if (pos < (2.5 / 2.75)) {
return (7.5625 * (pos -= (2.25 / 2.75)) * pos + 0.9375);
}
return (7.5625 * (pos -= (2.625 / 2.75)) * pos + 0.984375);
}")
library(tidyverse)
library(highcharter)
highchart() %>%
hc_chart(polar = T, type = "bar",
events = list(
render = JS("function() {
var chart = this,
middleElement = chart.middleElement;
if (middleElement) {
middleElement.destroy();
}
chart.middleElement = chart.renderer.circle(chart.plotSizeX / 2 + chart.plotLeft, chart.plotHeight / 2 + chart.plotTop, 20).attr({
zIndex: 3,
fill: '#ffffff'
}).add();
}")
)
) %>%
hc_title(text = "Athlete 1 vs Athlete 2") %>%
hc_xAxis(categories = c("Total Score", "Avg. Score", "Sum Score",
"Best Score"),
tickmarkPlacement = "on",
plotLines = list(
list(label = list(
rotation = 90))
)
) %>%
hc_yAxis(offset = 30) %>%
hc_series(
list(
pointPadding = 0,
groupPadding = 0,
name = "Athlete 1",
animatio = list(
duration = 1000,
easing = easeOutBounce
),
data = c(43000, 19000, 60000, 35000)
),
list(
pointPadding = 0,
groupPadding = 0,
name = "Athlete 2",
data = c(50000, 39000, 42000, 31000)
)
) %>%
hc_colors(c("firebrick", "steelblue")) %>%
hc_tooltip(
borderWidth = 0,
backgroundColor = 'none',
shadow = FALSE,
style = list(
fontSize = '16px'
),
headerFormat = '',
pointFormatter = JS("function() {
return this.y / 1000 + 'k'
}"),
positioner = JS("function(labelWidth, labelHeight) {
return {
x: (this.chart.plotSizeX - labelWidth) / 2 + this.chart.plotLeft,
y: (this.chart.plotSizeY - labelHeight) / 2 + this.chart.plotTop
};
}")
)
Thank you!
Animation doesn't work because you have a little typo in attached code. Please take a look on it:
animatio = list(
duration = 1000,
easing = easeOutBounce
),
Should be animation, not animatio. Please correct it, then animation should appear.
I am trying to implement a custom layer for the package keras in R (github).
The layer I am implementing is based on this AttentionWithContext layer available here: gist
Here is my code:
AttentionWithContext <- R6::R6Class("AttentionWithContext",
inherit = KerasLayer,
public = list(
W_regularizer = NULL,
b_regularizer = NULL,
u_regularizer = NULL,
W_constraint=NULL,
b_constraint=NULL,
u_constraint=NULL,
bias=NULL,
b=NULL,
W=NULL,
u=NULL,
supports_masking=NULL,
init=NULL,
name = NULL,
initialize = function(name = 'attention',
W_regularizer = NULL,
b_regularizer = NULL,
u_regularizer = NULL,
W_constraint=NULL,
b_constraint=NULL,
u_constraint=NULL,
bias=TRUE ) {
self$supports_masking = TRUE
self$init = keras::initializer_glorot_uniform()
self$W_regularizer = W_regularizer
self$b_regularizer = b_regularizer
self$u_regularizer = u_regularizer
self$W_constraint = W_constraint
self$b_constraint = b_constraint
self$u_constraint = u_constraint
self$bias = bias
self$name = name
},
build = function(input_shape) {
assertthat::assert_that(length(input_shape) == 3)
self$W = self$add_weight(shape = reticulate::tuple(input_shape[[3]],input_shape[[3]], NULL),
initializer = self$init,
name=stringr::str_interp('${self$name}_W'),
regularizer = self$W_regularizer,
constraint = self$W_constraint)
if (self$bias) {
self$b = self$add_weight(shape = reticulate::tuple(input_shape[[3]]),
initializer='zero',
name = stringr::str_interp('${self$name}_b'),
regularizer = self$b_regularizer,
constraint = self$b_constraint)
}
self$u = self$add_weight(shape = reticulate::tuple(input_shape[[3]]),
initializer=self$init,
name = stringr::str_interp('${self$name}_u'),
regularizer = self$u_regularizer,
constraint = self$u_constraint)
},
compute_mask = function(input, input_mask=NULL) {
return(NULL)
},
call = function(x, mask = NULL) {
uit = keras::k_squeeze(keras::k_dot(x, keras::k_expand_dims(self$W)), axis=-1)
if (self$bias) {
uit = uit + self$b
}
uit = keras::k_tanh(uit)
ait = keras::k_dot(uit, self$u)
a = keras::k_exp(ait)
if (!is.null(mask)) {
a = a * keras::k_cast(mask, keras::k_floatx())
}
a = a/keras::k_cast(keras::k_sum(a, axis = 1, keepdims = TRUE) + keras::k_epsilon(), keras::k_floatx())
weighted_input = x * keras::k_expand_dims(a)
keras::k_sum(weighted_input, axis=1)
},
compute_output_shape = function(input_shape) {
list(input_shape[[1]], input_shape[[3]])
}
)
)
# define layer wrapper function
layer_attention_with_context <- function(object, W_regularizer = NULL,
b_regularizer = NULL,
u_regularizer = NULL,
W_constraint=NULL,
b_constraint=NULL,
u_constraint=NULL,
bias=TRUE,
name = 'attention_with_context') {
create_layer(AttentionWithContext, object, list(W_regularizer = W_regularizer,
b_regularizer = b_regularizer,
u_regularizer = u_regularizer,
W_constraint= W_constraint,
b_constraint=b_constraint,
u_constraint=u_constraint,
bias=bias,
name = name
))
}
# Example
model <- keras_model_sequential()
model %>%
layer_embedding(input_dim = 20000,
output_dim = 128,
input_length = 30) %>%
layer_lstm(64, return_sequences = TRUE) %>%
layer_attention_with_context() %>%
time_distributed(layer_dense(units=10))
When I run this, I get a cryptic error message:
Error in py_call_impl(callable, dots$args, dots$keywords) :
RuntimeError: Evaluation error: TypeError: unsupported operand type(s) for *: 'NoneType' and 'int'.
I tried to explore this error and I think it might come from this line :
reticulate::tuple(input_shape[[3]],input_shape[[3]], NULL)
In the original code, in python, we can see this:
(input_shape[-1], input_shape[-1],)
I could not find a way to create this structure in R.
Any ideas ?
First of all thank you for spending a little bit of your time helping me to solve this issue.
I am getting started in plot_ly through R and I am struggling when trying to change the format of the values of my Pie Chart (I want them to be showed in the plot as currency "$" format).
So far my code looks like:
data <- data.frame(Level = c("Receipt","Disbursement"),Amount = c(1000,2000))
name_dataset <- "Overview"
plot_ly(data=data, labels = Level, values = Amount, type = "pie", textinfo= "label+percent",
hoverinfo = "label+percent+value", outsidetextfont = list(color = "white")) %>% layout(title = paste0(paste(unlist(strsplit(name_dataset,"_")),collapse = " ")))
Thank you for your help!
Are you looking for something like this:
data$AmountB <- prettyNum(data$Amount, big.mark=",",scientific=FALSE) #EDIT
data$AmountB <- paste(data$AmountB, "$", sep="")
plot_ly(data=data, labels = Level, values = Amount, type = "pie", textinfo= "text", text=AmountB,hoverinfo = "text", outsidetextfont = list(color = "white")) %>%
layout(title = paste0(paste(unlist(strsplit(name_dataset,"_")),collapse = " ")))
var text = [15588, 16787, 27778].map(function (v, i) {
return currencyFormatterForUI(v) //format here
});
var chartObj = {
header: 'New Backlog',
description: 'Total Value of Recently Added (Last 30 Days) Backlog by Issue Type',
type: 'chart',
id: 'div4',
layout: {
margin: {
autoexpand: true,
r: 25,
t: 20,
b: 20,
l: 25
},
legend: {
'orientation': 'h',
xanchor: 'center',
yanchor: 'top',
y: -0.1, // play with it
x: 0.5 // play with it
},
},
data: [{
values: [15588, 16787, 27778],
labels: ['Bug', 'Improvement', 'Story'],
text: text,
type: 'pie',
textinfo: 'label+text',
hoverinfo: 'label+text+percent'
}],
};
var myPlot = document.getElementById('div4');
Plotly.plot(myPlot, chartObj);
function currencyFormatterForUI(value) {
const formatter = new Intl.NumberFormat('en-US', {
style: 'currency',
currency: 'USD',
minimumFractionDigits: 0,
maximumFractionDigits: 0
});
return formatter.format(value || 0);
}
<script src="https://cdn.plot.ly/plotly-latest.min.js"></script>
<div id="div4"></div>
I am trying to show a different table or plot in a different div when a bar on a a bar plot is clicked. I have come this far.
server.R
library(shiny)
shinyServer(function(input,output,session) {
custom_data = # a data frame in R
barclick_func <- "#! function() {
var cats = ['100','200','3000','4000'];
var datum = [20,40,30,10];
}
$('#container_subcat').highcharts({
chart: {
type: 'column',
},
xAxis: { categories:cats },
series: [{data :datum}]
});
} !#"
output$my_plot <- renderChart2({
a <- hPlot(x="id",y="variable",data=custom_data,type="column")
a$tooltip( animation = 'true', formatter = "#! function() {return '<b>' + 'Frequency of tag_id ' + this.x + '</b>' + ' is ' + this.y;} !#")
a$plotOptions(series = list(color = '#388E8E'),column = list(dataLabels = list(enabled = T, rotation =-90, align = 'right', color = '#FFFFFF', x = 4, y = 10),
cursor = 'pointer', point = list(events = list(click = barclick_func))))
return(a)
})
})
ui.R
library(shiny)
require(rCharts)
shinyUI(fluidPage(
tags$head(
tags$link(rel = "stylesheet", type = "text/css", href = "custom.css"),
tags$script(src="http://code.jquery.com/jquery-git2.min.js"),
),
titlePanel("Test"),
fluidRow(
showOutput("my_plot","highcharts")
),
div(id="container_subcat",style="min-width: 310-px; height: 400px; margin: 0 auto; margin-top:100px;")
)
))
In the above server.R script, in barclick_func() function, the data(variables cats and datum) is hardcoded. The above app works as expected when a bar is clicked, another plot pops up properly with the data.
But, if I want to use another data, that is if I have another data frame in R and want to use that data frame in barclick_func(), the console is throwing an error that the variable is not recognized and if I look at the type of that variable, it shows as 'undefined'. Can anyone suggest how to send data to the javascript function in this particular case. Ideally, my desired code is this.
server.R
library(shiny)
shinyServer(function(input,output,session) {
custom_data = # a data frame in R
custom_data2 = # another data frame in R for which I wanna shoe a plot when the bar is clicked.
barclick_func <- "#! function() {
var cats = #subsetting custom_data2 ;
var datum = #subsetting custom_data2 ;
}
$('#container_subcat').highcharts({
chart: {
type: 'column',
},
xAxis: { categories:cats },
series: [{data :datum}]
});
} !#"
output$my_plot <- renderChart2({
a <- hPlot(x="id",y="variable",data=custom_data,type="column")
a$tooltip( animation = 'true', formatter = "#! function() {return '<b>' + 'Frequency of tag_id ' + this.x + '</b>' + ' is ' + this.y;} !#")
a$plotOptions(series = list(color = '#388E8E'),column = list(dataLabels = list(enabled = T, rotation =-90, align = 'right', color = '#FFFFFF', x = 4, y = 10),
cursor = 'pointer', point = list(events = list(click = barclick_func))))
return(a)
})
})
You could try using paste to add the data to your barclick_func.
For example:
custom_data2 = data.frame(cats=c(100,200,3000,400),datum=c(20,40,30,10))
barclick_func <- paste("#! function() {
var cats = ",paste('[',paste(custom_data2$cats,collapse=','),']',sep=''),"
var datum = ",paste('[',paste(custom_data2$datum,collapse=','),']',sep=''),";
}
$('#container_subcat').highcharts({
chart: {
type: 'column',
},
xAxis: { categories:cats },
series: [{data :datum}]
});
} !#")
Should give the same barclick_func as in your hardcoded version.