ggplot legend labels and colors - r

I am struggling with ggplot to produce the legend of this figure. For now, I am only doing for one map, when it works I'l produce the four maps in the same plot.
I would like a legend like this: bottom, title in the center and above the scale, labels and colors, and omit the NA values.
Here is my code:
Reading the shapefile and installing a new variable
map_ev#data$id = rownames(map_ev#data)
map_ev.points = fortify(map_ev, region="id")
map_ev.df = join(map_ev.points, map_ev#data, by="id")
map_ev.df$median_norm = map_ev.df$median / map_ev.df$VOM
Vector with theme opts for ggplot
theme_opts <- list(theme(panel.grid.minor = element_blank(),
panel.grid.major = element_blank(),
panel.background = element_blank(),
panel.border = element_blank(),
axis.line = element_blank(),
axis.text.x = element_blank(),
axis.text.y = element_blank(),
axis.ticks = element_blank(),
axis.title.x = element_blank(),
axis.title.y = element_blank(),
plot.title = element_text(size=12, hjust=0.5),
legend.position = "bottom",
legend.title=element_blank()))
Installing the variable breaks
map_ev.df$median_norm <- cut(map_ev.df$median_norm, breaks=c(-200, -100, -50, -20, -5, 0, 5, 20, 50, 100, +200))
Checking the breaks
levels(map_ev.df$median_norm)
Colors to be used
color_map <- palette(c("#5b2e07", "#904d07", "#b98436", "#dfc27e", "#f6e8c3",
"#c9e9e4", "#84cdc4", "#3c958f", "#01675a", "#073a31"))
ggplot code
ggplot(map_ev.df) +
aes(long,lat,group=group,fill=median_norm, color=median_norm) +
geom_polygon() + geom_path(color="black") +
labs(title="Equivalent variation") + coord_equal() +
theme_opts
For now I am getting this figure:
Thanks all, I appreciate your help!

I just noticed you wanted manual colours for the fill. You can use:
myscale <- c("(-1,10]"="#BBDF27", "(10,20]"="#43BF71", "(20,30]"="#21908C", "(30,50]"="#35608D", "(50,101]"="#482576", "(101,300]"="#ffeeed")
combined with:
scale_fill_manual(values=myscale,na.value="#e0e0e0",name="",labels=c("<10","10 - 20","20 - 30","30 - 50", ">50","Estimate", "NA"))
where scale_fill manual replaces scale_fill_brewer in the other answer.
Just replace the colour and label values with your own. The values that need to go into myscale are shown when you plot your map without any labels. Good luck!

The reason you don't have a title, is because you never specified one, and if you did, you're deleting it again by writing legend.title=element_blank() in theme. Instead I rewrote it to specify the title should be centered. Using guides(colour = guide_legend(title.position = "top"),fill = guide_legend(title.position = "top",nrow=1,byrow=TRUE)) I set the position to "top" and made sure it will only be one row of legend items. (I left colour= here in case you do need it).
You also seem to want black borders, this means I deleted all colour= since that specifies the colour of the borders.
I've added a scale_fill_brewer, there are more color palettes available. Within this you can specify your legend title and the appearance of your legend labels. These need to be manually adjusted every time you change your input data, by the way.
I don't know how to remove the legend item for NA, sorry.
This is the total code I came up with:
ggplot(map_ev.df) +
aes(long,lat,group=group,fill=median_norm) +
scale_fill_brewer(palette="BrBG",name= "Title of legend",labels=c("-200 - -100","-100 - 50","-5 - 0","0 - 5", "label for NA"))+
geom_polygon() + geom_path(color="black") +
labs(title="Equivalent variation") + coord_equal() +
theme(panel.grid.minor = element_blank(),
panel.grid.major = element_blank(),
panel.background = element_blank(),
panel.border = element_blank(),
axis.line = element_blank(),
axis.text.x = element_blank(),
axis.text.y = element_blank(),
axis.ticks = element_blank(),
axis.title.x = element_blank(),
axis.title.y = element_blank(),
plot.title = element_text(size=12, hjust=0.5),
legend.position = "bottom",
legend.direction = "horizontal",
legend.title = element_text(hjust=0.5))+
guides(colour = guide_legend(title.position = "top"),fill = guide_legend(title.position = "top",nrow=1,byrow=TRUE))
Using some data of my own for the fill:
map

Related

ggplot2: remove geom_tile wired top and bottom block

I tried to plot a matrix using geom_tile. However, I noticed there are two strange blocks appear at the top and bottom of my plot. My initial guess was these are ticks element. I've tried to specify the theme parameters as far as I know but no luck.
Basically, I want to remove the two wired blocks that I marked in red arrow. The left plot is something that I desired except the white block. The right plot is I tuned the plot.background in theme to show you there are something I don't know occupies the area.
Image here
I also attached the minimal code that could reproduce the left plot:
test2 <- matrix(runif(100*100),nrow = 100)
testdf <- test2 %>% reshape2::melt()
testdf$Var2 <- factor(testdf$Var2,levels=(seq(max(testdf$Var2),1))) # you could ignore this line
testdf %>% ggplot() + geom_tile(aes(x=Var2,y=Var1,fill=log2(value+1))) +
scale_fill_gradientn(colors = c("#ffffff","#f9c979","#ec8121","#b80217","#2f0006")) +
theme(axis.title = element_blank(),
axis.text = element_blank(),
axis.ticks = element_blank(),
legend.title = element_blank(),
panel.background = element_blank(),
panel.border = element_rect(colour = "black", fill=NA, size=1),
plot.background = element_blank()) + coord_equal()
These blocks are the result of ggplot2's default expansion of the scale. To get rid of these block set the expansion to zero via scale_y_continuous:
library(ggplot2)
library(reshape2)
test2 <- matrix(runif(100*100),nrow = 100)
testdf <- reshape2::melt(test2)
testdf$Var2 <- factor(testdf$Var2,levels=(seq(max(testdf$Var2),1))) # you could ignore this line
ggplot(testdf) +
geom_tile(aes(x=Var2,y=Var1,fill=log2(value+1))) +
scale_y_continuous(expand = c(0,0)) +
scale_fill_gradientn(colors = c("#ffffff","#f9c979","#ec8121","#b80217","#2f0006")) +
theme(axis.title = element_blank(),
axis.text = element_blank(),
axis.ticks = element_blank(),
legend.title = element_blank(),
panel.background = element_blank(),
panel.border = element_rect(colour = "black", fill=NA, size=1),
plot.background = element_blank()) + coord_equal()

Spacing out legend keys using tmap/ggplot2 in R

I'm trying to produce a map using either the tmap or ggplot2 packages and need to follow some internal design guidelines which state that legend keys should be spaced out and rectangular in shape.
I have tried tmap but the legend keys are square and stacked on top of each other without any spacing. I cannot figure out how to change the shape to rectangles and how to space out the keys.
In ggplot2, I get rectangles but the spacing seems to be fixed. Is there a way to space the keys out in ggplot2 (or tmap)?
theme_opts <- list(theme(panel.grid.minor = element_blank(),
panel.grid.major = element_blank(),
panel.background = element_blank(),
plot.background = element_blank(),
panel.border = element_blank(),
axis.line = element_blank(),
axis.text.x = element_blank(),
axis.text.y = element_blank(),
axis.ticks = element_blank(),
axis.title.x = element_blank(),
axis.title.y = element_blank(),
legend.position=c(0.015, 0.7),
legend.background = element_rect(fill=alpha("white", 0)),
legend.key.width = unit(1, "cm"),
legend.key.height = unit(0.2, "cm"),
legend.spacing.y = unit(1, "cm"),
legend.title = element_text(size=14, family="Tahoma"),
legend.text = element_text(size=12, family="Tahoma")))
p <- ggplot() +
geom_sf(data = map_data_full, aes(fill = TransmissionClassification), size = 0.5, color = "gray10") +
scale_fill_manual(values = colours, breaks = transmission_levels) +
geom_sf(data = map_data_borders, fill = NA, size = 1, color = "black") +
coord_sf(xlim = c(1405044, 7120890), ylim = c(1291822, 5218781)) +
theme_opts
This is how the legend looks:
And this is what I would like:

Adjusting Title & Figsize in R

For this problem I am required to use ggplot2 and ggplot2 only. I have a barplot similar to the one below:
I would like to insert a title on the upper left corner but somehow it keeps ending up in the wrong place.
geom_text(stat='count', aes(label = ..count..), vjust = -1) +
theme(panel.background = element_blank(),
axis.text.y = element_blank(),
axis.title.y = element_text(),
axis.ticks.y = element_blank(),
axis.title.x = element_blank(),
plot.margin = margin(1,1,1,1),
panel.border = element_rect(fill = NA))
Furthermore I run into the problem of reshaping the plot. I would like the height of the plot to be much smaller but have the same width. Whenever I try it myself i can crop the plot but parts of the biggest bar are being cropped of aswell.
Can anyone help me?

size argument not working in geom_errorbar in ggplot2

I am trying to create a graph of value ranges so that they can be compared to a unique range (represented by a gray rectangle in the graph). I got the graph to work just like I wanted to it but I cannot effectively change the line weight of the error bars that I am using to represent the value ranges. The code it below with example figures.
### Graph with default line weights
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geom_errorbar(aes(ymin=wght2[which(wght2$Zone!="Oahu"),4], ymax=wght2[which(wght2$Zone!="Oahu"),4+3], width=0.3, color=wght2[which(wght2$Zone!="Oahu"),2])) +
geom_rect(ymin=wght2[8,4], ymax=wght2[8,4+3], xmin=0.5, xmax=6+0.5, fill="gray25", linetype=0, alpha=0.07)+
scale_color_manual(values=c("forestgreen","deepskyblue3","gold"))+
scale_x_continuous(labels=levels(wght2$Zone), breaks=c(1,2,3.5,5.5))+
labs(x="Zone",y=measure3[4]) +
theme(axis.line = element_line(colour = "black"),
panel.grid.major = element_blank(),
panel.grid.minor = element_blank(),
panel.border = element_blank(),
panel.background = element_blank(),
legend.text = element_text(size = 16),
legend.title = element_text(size=16),
axis.text = element_text(size = 16,colour="black"),
axis.title = element_text(size = 18)) +
theme(legend.position="topright")
### My attempt to change line weights
ggplot(data=droplevels(wght2[which(wght2$Zone!="Oahu"),]), aes(x=wght2$num[wght2$Zone!="Oahu"], y=(wght2[which(wght2$Zone!="Oahu"),4]+wght2[which(wght2$Zone!="Oahu"),4+3])/2,
group= wght2[which(wght2$Zone!="Oahu"),2], color= wght2[which(wght2$Zone!="Oahu"),2])) +
geom_errorbar(aes(ymin=wght2[which(wght2$Zone!="Oahu"),4], ymax=wght2[which(wght2$Zone!="Oahu"),4+3], width=0.3, size=0.5, color=wght2[which(wght2$Zone!="Oahu"),2])) +
geom_rect(ymin=wght2[8,4], ymax=wght2[8,4+3], xmin=0.5, xmax=6+0.5, fill="gray25", linetype=0, alpha=0.07)+
scale_color_manual(values=c("forestgreen","deepskyblue3","gold"))+
scale_x_continuous(labels=levels(wght2$Zone), breaks=c(1,2,3.5,5.5))+
labs(x="Zone",y=measure3[4]) +
theme(axis.line = element_line(colour = "black"),
panel.grid.major = element_blank(),
panel.grid.minor = element_blank(),
panel.border = element_blank(),
panel.background = element_blank(),
legend.text = element_text(size = 16),
legend.title = element_text(size=16),
axis.text = element_text(size = 16,colour="black"),
axis.title = element_text(size = 18)) +
theme(legend.position="topright")
As you can see from my code when I include the 'size' argument in the 'aes' function of geom_errorbar, the line weights become huge even though I set it at the default which is 0.5.
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Changing the color of the title in a ggplot

I have been working with this for some time and can't find any reasonable explanation for why the names of my x and y axis are the correct color, but not the title.
p <- ggplot(movies, aes(x=budget, y=rating))+
geom_point(shape=1) +
theme(axis.title.x = element_text(colour = "#7F3D17"),
axis.title.y = element_text(colour = "#7F3D17"),
axis.title = element_text(colour = "#7F3D17"),
panel.background = element_rect(fill='#FFD197'),
panel.grid.major = element_blank(),
panel.grid.minor = element_blank(),
panel.border = element_blank()) +
labs(x="Budget (in millions)", y="Rating", title="Scatterplot of budget vs movies")
p
The scatterplot looks like this (notice that the title is still black):
If anyone could help I would greatly appreciate it.
You are using axis.title = element_text(colour = "#7F3D17") to get the right color for the title. But you should be using plot.title = element_text(colour = "#7F3D17").
With axis.title you define the setting for both axis, whereas with axis.title.x or axis.title.y you define the setting for the x-axis title or y-axis title specifically.
Because you are using the same color for all the titles, you can also use title = element_text(colour = "#7F3D17") which should set the color of the plot title, axis titles and legend title to the same color.

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