rate_limit() returns wrong reset time - r

rate_limit() from rtweet returns wrong value in column reset. Instead of showing 15, it shows values around 14.59. It varies between 14.59 and 14.61. I think it is not a problem with rtweet package but probably with either my system or time I have set on my computer.
I can not figure out what might be the reason. The only thing I managed to find out is that when I use Sys.time on my computer and some other computer, on which rate_limit works fine, there is 25 seconds difference. 25 seconds is around 41% of a minute so it seems that it might be a problem, however I don't know how to solve it. Below SessionInfo:
R version 3.4.3 (2017-11-30)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS High Sierra 10.13.3
Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib
locale:
[1] pl_PL.UTF-8/pl_PL.UTF-8/pl_PL.UTF-8/C/pl_PL.UTF-8/pl_PL.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] bindrcpp_0.2 feather_0.3.1 magrittr_1.5 forcats_0.2.0 stringr_1.2.0 dplyr_0.7.4
[7] purrr_0.2.4 readr_1.1.1 tidyr_0.7.2 tibble_1.3.4 ggplot2_2.2.1 tidyverse_1.2.1
[13] rtweet_0.6.0
loaded via a namespace (and not attached):
[1] reshape2_1.4.3 haven_1.1.0 lattice_0.20-35 colorspace_1.3-2 htmltools_0.3.6 base64enc_0.1-3
[7] yaml_2.1.14 rlang_0.1.4 foreign_0.8-69 glue_1.1.1 bit64_0.9-7 modelr_0.1.1
[13] readxl_1.0.0 bindr_0.1 plyr_1.8.4 munsell_0.4.3 gtable_0.2.0 cellranger_1.1.0
[19] rvest_0.3.2 evaluate_0.10.1 psych_1.7.8 knitr_1.17 httpuv_1.3.5 parallel_3.4.3
[25] curl_2.8.1 broom_0.4.2 Rcpp_0.12.13 openssl_0.9.7 scales_0.5.0 backports_1.1.1
[31] jsonlite_1.5 bit_1.1-12 mnormt_1.5-5 hms_0.3 digest_0.6.12 stringi_1.1.5
[37] grid_3.4.3 rprojroot_1.2 cli_1.0.0 tools_3.4.3 lazyeval_0.2.0 crayon_1.3.4
[43] pkgconfig_2.0.1 xml2_1.1.1 lubridate_1.7.2 assertthat_0.2.0 rmarkdown_1.6 httr_1.3.1
[49] rstudioapi_0.7 R6_2.2.2 nlme_3.1-131 compiler_3.4.3

Somehow the issue solved itself. I changed timezone (traveled from US back to Europe) and now it works fine.

Related

R : problem in installing package 'Frostarella/DSUR.noof'

I am trying to install DSUR.noof package from GitHub and followed the instructions accordingly
install.packages("devtools")
library(devtools)
install_github("Frostarella/DSUR.noof")
When I try to run the last command(install_github("Frostarella/DSUR.noof") I am getting the below error in Rstudio
Error: 'setInternet2' is defunct.
what could went wrong ? can some one help me
> sessionInfo()
R version 3.5.1 (2018-07-02)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows >= 8 x64 (build 9200)
Matrix products: default
locale:
[1] LC_COLLATE=English_Sweden.1252
[2] LC_CTYPE=English_Sweden.1252
[3] LC_MONETARY=English_Sweden.1252
[4] LC_NUMERIC=C
[5] LC_TIME=English_Sweden.1252
attached base packages:
[1] stats graphics grDevices utils datasets
[6] methods base
other attached packages:
[1] usethis_1.4.0 devtools_2.0.1 ggplot2_3.1.0
loaded via a namespace (and not attached):
[1] Rcpp_0.12.18 pillar_1.3.0 compiler_3.5.1
[4] plyr_1.8.4 bindr_0.1.1 remotes_2.0.2
[7] prettyunits_1.0.2 tools_3.5.1 digest_0.6.15
[10] pkgbuild_1.0.2 pkgload_1.0.2 memoise_1.1.0
[13] tibble_1.4.2 gtable_0.2.0 pkgconfig_2.0.1
[16] rlang_0.2.1 cli_1.0.0 rstudioapi_0.7
[19] yaml_2.2.0 bindrcpp_0.2.2 withr_2.1.2
[22] dplyr_0.7.6 fs_1.2.6 desc_1.2.0
[25] rprojroot_1.3-2 grid_3.5.1 tidyselect_0.2.4
[28] glue_1.3.0 R6_2.2.2 processx_3.2.1
[31] sessioninfo_1.1.1 purrr_0.2.5 callr_3.1.1
[34] magrittr_1.5 backports_1.1.2 scales_1.0.0
[37] ps_1.3.0 assertthat_0.2.0 colorspace_1.4-0
[40] labeling_0.3 lazyeval_0.2.1 munsell_0.5.0
[43] crayon_1.3.4
I was running on Anaconda Rstudio before, then installed CRAN R problem solved.....

render / build_site not working when a chunk contains ggplot images

When I try to render an rmarkdown file with a ggplot image, all the chunks work that do not contain a ggplot image and it fails without an error when it tries to run said chunk.
The output I get in my terminal is
Killed
It runs fine on my local machine with the latest version of R and all the packages updated.
Below is the environment I am using in docker to try to run the same thing (when it fails).
R version 3.4.1 (2017-06-30)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: Amazon Linux AMI 2017.09
Matrix products: default
BLAS/LAPACK: /usr/lib64/R/lib/libRblas.so
locale:
[1] C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] bindrcpp_0.2.2 blogdown_0.10 rmarkdown_1.11 here_0.1
[5] PRROC_1.3.1 DT_0.5 forcats_0.3.0
stringr_1.3.1
[9] dplyr_0.7.8 purrr_0.2.5 readr_1.3.1
tidyr_0.8.2
[13] tibble_2.0.1 ggplot2_3.1.0 tidyverse_1.2.1
data.table_1.12.0
loaded via a namespace (and not attached):
[1] Rcpp_1.0.0 lubridate_1.7.4 lattice_0.20-35
assertthat_0.2.0
[5] rprojroot_1.3-2 digest_0.6.18 mime_0.6 R6_2.3.0
[9] cellranger_1.1.0 plyr_1.8.4 backports_1.1.3 evaluate_0.12
[13] httr_1.4.0 pillar_1.3.1 rlang_0.3.1
lazyeval_0.2.1
[17] readxl_1.2.0 rstudioapi_0.9.0 Matrix_1.2-10
reticulate_1.10
[21] htmlwidgets_1.3 munsell_0.5.0 shiny_1.2.0 broom_0.5.1
[25] compiler_3.4.1 httpuv_1.4.5.1 modelr_0.1.2 xfun_0.4
[29] pkgconfig_2.0.2 htmltools_0.3.6 tidyselect_0.2.5 crayon_1.3.4
[33] withr_2.1.2 later_0.7.5 grid_3.4.1 nlme_3.1-131
[37] jsonlite_1.6 xtable_1.8-3 gtable_0.2.0 magrittr_1.5
[41] scales_1.0.0 cli_1.0.1 stringi_1.2.4
promises_1.0.1
[45] xml2_1.2.0 generics_0.0.2 tools_3.4.1 glue_1.3.0
[49] hms_0.4.2 crosstalk_1.0.0 yaml_2.2.0
colorspace_1.4-0
[53] rvest_0.3.2 knitr_1.21 bindr_0.1.1 haven_2.0.0

Why is my resource_map function in R asking for a quasiquoted argument?

I am trying to run (in R) this off-the-shelf example from the Resource Map function help page:
library(bupaR)
library(eventdataR)
data(patients)
resource_map(patients)
and somehow it is returning this error:
Error: UQ() can only be used within a quasiquoted argument
Can someone help me understand and propose a fix as well? Is it something with my R/Rstudio, because this example comes straight from the "resource_map" help page.
Here is the sessioninfo:
R version 3.4.3 (2017-11-30) Platform: x86_64-apple-darwin15.6.0
(64-bit) Running under: macOS High Sierra 10.13.3
Matrix products: default BLAS:
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK:
/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib
locale: [1]
en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages: [1] stats graphics grDevices utils
datasets methods base
other attached packages: [1] bindrcpp_0.2 xesreadR_0.2.2
processmonitR_0.1.0 processmapR_0.2.1 eventdataR_0.1.2
petrinetR_0.1.0 [7] edeaR_0.7.2 bupaR_0.3.2
loaded via a namespace (and not attached): [1] Rook_1.1-1
purrr_0.2.4 ggthemes_3.4.0 colorspace_1.3-2
viridisLite_0.3.0 miniUI_0.1.1 [7] htmltools_0.3.6
yaml_2.1.17 plotly_4.7.1 XML_3.98-1.10
rlang_0.2.0 pillar_1.2.1 [13] glue_1.2.0
RColorBrewer_1.1-2 bindr_0.1 plyr_1.8.4
stringr_1.3.0 munsell_0.4.3 [19] gtable_0.2.0
visNetwork_2.0.3 htmlwidgets_1.0 forcats_0.3.0
httpuv_1.3.6.2 DiagrammeR_0.9.2 [25] Rcpp_0.12.15
xtable_1.8-2 readr_1.1.1 scales_0.5.0
jsonlite_1.5 rgexf_0.15.3 [31] mime_0.5
gridExtra_2.3 brew_1.0-6 ggplot2_2.2.1 hms_0.4.1
digest_0.6.15 [37] stringi_1.1.6 dplyr_0.7.4
shiny_1.0.5 grid_3.4.3 influenceR_0.1.0
tools_3.4.3 [43] magrittr_1.5 lazyeval_0.2.1
tibble_1.4.2 tidyr_0.8.0 pkgconfig_2.0.1 xml2_1.2.0
[49] data.table_1.10.4-3 downloader_0.4 lubridate_1.7.3
httr_1.3.1 assertthat_0.2.0 rstudioapi_0.7 [55]
viridis_0.5.0 R6_2.2.2 igraph_1.1.2
shinyTime_0.2.1 compiler_3.4.3
Thanks!

koRpus package utilising TreeTagger within R (RStudio) on macOS

im exploring the koRpus package in R on macOS, in trying to use the treetag function on the following object:
text
[1] "Because I could not stop for Death -" "He kindly stopped for me -"
[3] "The Carriage held but just Ourselves -" "and Immortality"
using the following syntax
> tagged.text <- treetag(as.vector(paste(text, collapse = '')), format = "obj", debug = TRUE)
i get the following error
file: /var/folders/bt/sdf_vz6d3qbd188c7tkz50gw0000gn/T//RtmpoatWov/tempTextFromObject12d3d169614b6.txt
sys.tt.call: /Applications/treetagger/cmd/tree-tagger-english /var/folders/bt/sdf_vz6d3qbd188c7tkz50gw0000gn/T//RtmpoatWov/tempTextFromObject12d3d169614b6.txt
Error in matrix(unlist(strsplit(tagged.text, "\t")), ncol = 3, byrow = TRUE, :
'data' must be of a vector type, was 'NULL'
when i try the emboldened command above on its equivalent, i get this
matrix(unlist(strsplit(paste(text, collapse = ''), "\t")))
[,1] [1,] "Because I could not stop for Death -He kindly stopped for me
-The Carriage held but just Ourselves -and Immortality"
my workspace is as follows
sessionInfo() R version 3.4.2 (2017-09-28) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: macOS High Sierra
10.13.1
Matrix products: default BLAS:
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK:
/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib
locale: [1]
en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages: [1] stats graphics grDevices utils
datasets methods base
other attached packages: [1] quanteda_0.99.12 koRpus_0.10-2
data.table_1.10.4-3 scales_0.5.0 [5] purrr_0.2.4
readr_1.1.1 tidyr_0.7.2 tibble_1.3.4 [9]
tidyverse_1.1.1 gutenbergr_0.1.3 ggplot2_2.2.1
stringr_1.2.0 [13] dplyr_0.7.4 janeaustenr_0.1.5
tidytext_0.1.4
loaded via a namespace (and not attached): [1] reshape2_1.4.2
haven_1.1.0 lattice_0.20-35 colorspace_1.3-2 [5]
htmltools_0.3.6 SnowballC_0.5.1 yaml_2.1.14
rlang_0.1.2 [9] foreign_0.8-69 glue_1.2.0
modelr_0.1.1 readxl_1.0.0 [13] bindrcpp_0.2
bindr_0.1 plyr_1.8.4 munsell_0.4.3 [17]
gtable_0.2.0 cellranger_1.1.0 rvest_0.3.2
psych_1.7.8 [21] evaluate_0.10.1 knitr_1.17
forcats_0.2.0 parallel_3.4.2 [25] broom_0.4.2
tokenizers_0.1.4 Rcpp_0.12.13 backports_1.1.1 [29]
RcppParallel_4.3.20 jsonlite_1.5 fastmatch_1.1-0
mnormt_1.5-5 [33] hms_0.3 digest_0.6.12
stringi_1.1.5 bookdown_0.5 [37] grid_3.4.2
rprojroot_1.2 tools_3.4.2 magrittr_1.5 [41]
lazyeval_0.2.1 pkgconfig_2.0.1 Matrix_1.2-11 xml2_1.1.1
[45] lubridate_1.7.1 assertthat_0.2.0 rmarkdown_1.6
httr_1.3.1 [49] R6_2.2.2 nlme_3.1-131
compiler_3.4.2

ggparagraph is not displayed

I have problem with the function ggparagraph() from ggpubr package. Its content is not drawing. If I use the function:
example(ggparagraph)
The plot is drawing without any problem, but the "ggparagraph area" (below plot) is empty. The same problem is if I use custom scripts, where the ggparagraph is applied.
R does not print any error message. Where can be the problem?
My session info is:
sessionInfo()
R version 3.4.1 (2017-06-30)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 15063)
Matrix products: default
locale:
1 LC_COLLATE=Slovak_Slovakia.1250 LC_CTYPE=Slovak_Slovakia.1250
[3] LC_MONETARY=Slovak_Slovakia.1250 LC_NUMERIC=C
[5] LC_TIME=Slovak_Slovakia.1250
attached base packages:
1 stats graphics grDevices utils datasets methods base
other attached packages:
1 ggpubr_0.1.4 magrittr_1.5 gridExtra_2.2.1 dplyr_0.7.2
[5] purrr_0.2.3 readr_1.1.1 tidyr_0.6.3 tibble_1.3.3
[9] ggplot2_2.2.1 tidyverse_1.1.1
loaded via a namespace (and not attached):
1 Rcpp_0.12.12 cellranger_1.1.0 compiler_3.4.1 plyr_1.8.4
[5] bindr_0.1 forcats_0.2.0 tools_3.4.1 jsonlite_1.5
[9] lubridate_1.6.0 nlme_3.1-131 gtable_0.2.0 lattice_0.20-35
[13] pkgconfig_2.0.1 rlang_0.1.2 psych_1.7.5 parallel_3.4.1
[17] haven_1.1.0 bindrcpp_0.2 xml2_1.1.1 stringr_1.2.0
[21] httr_1.2.1 hms_0.3 cowplot_0.8.0 grid_3.4.1
[25] glue_1.1.1 R6_2.2.2 readxl_1.0.0 foreign_0.8-69
[29] reshape2_1.4.2 modelr_0.1.1 scales_0.4.1 rvest_0.3.2
[33] assertthat_0.2.0 mnormt_1.5-5 colorspace_1.3-2 labeling_0.3
[37] stringi_1.1.5 lazyeval_0.2.0 munsell_0.4.3 broom_0.4.2
Finally, I don't find where is the problem, but if I install this package from github (instead of CRAN), all paragraphs are rendered correctly.

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