R Package installed but cannot be loaded? - r

I installed the "digest" package in R.
> install.packages("digest")
Installing package into ‘C:/Users/user/Documents/R/win-library/3.3’
(as ‘lib’ is unspecified)
trying URL 'https://mran.microsoft.com/snapshot/2017-03-15/bin/windows/contrib/3.3/digest_0.6.12.zip'
Content type 'application/zip' length 172746 bytes (168 KB)
downloaded 168 KB
package ‘digest’ successfully unpacked and MD5 sums checked
Warning in install.packages :
cannot remove prior installation of package ‘digest’
The downloaded binary packages are in
C:\Users\user\AppData\Local\Temp\RtmpaMPhK6\downloaded_packages
I confirmed that this package is installed in:
C:\Program Files\R\R-3.3.2\library\digest
My repos are:
getOption("repos")
CRAN CRANextra
"https://mran.microsoft.com/snapshot/2017-03-15" "http://www.stats.ox.ac.uk/pub/RWin"
Then I wanted to install "kableExtra" package. But I am getting an error message that the there is no "digest":
> library(kableExtra)
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called ‘digest’
Error: package or namespace load failed for ‘kableExtra’
What is wrong? Is this due to the fact that the original library is from CRAn, but for some reason this "digest" package is coming from MRAN? How can I fix this?

Related

Installing package in R: there is no package called ‘gsl’

I tried to install package copula but incurred error.
I first installed package copula, then tried:
library(copula)
and get:
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Error: package or namespace load failed for ‘copula’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called ‘gsl’
Then I installed package gsl, restarted R, and tried, following this similar issue:
if(!require(pacman)) install.packages("pacman")
pacman::p_load(copula)
which didn't seem to work. I'm using macOS Big Sur OS.
Edit:
install.packages("gsl")
returned:
There is a binary version available but the source version is later:
Warning in install.packages :
cannot open compressed file '/Users/xxx/.rstudio-desktop/notebooks/3D993D5E-filename/1/8FD36A93A05DA0F7/c6uz0e7whq1or_t/_rs_rdf_111422764b18d.rdf', probable reason 'No such file or directory'
Error in install.packages : cannot open the connection
Update:
On 18/05/21, tried
install.packages("copula")
library(copula)
and caught error below:
> install.packages("copula")
also installing the dependency ‘gsl’
There is a binary version available but the source version is later:
Do you want to install from sources the package which needs compilation? (Yes/no/cancel) Y
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/copula_1.0-1.tgz'
Content type 'application/x-gzip' length 7335219 bytes (7.0 MB)
==================================================
downloaded 7.0 MB
The downloaded binary packages are in
/var/folders/ll/dvpphrys0pddnjffq7zbl7vm0000gn/T//RtmpRUGsKi/downloaded_packages
installing the source package ‘gsl’
trying URL 'https://cran.rstudio.com/src/contrib/gsl_2.1-6.tar.gz'
Content type 'application/x-gzip' length 189794 bytes (185 KB)
==================================================
downloaded 185 KB
* installing *source* package ‘gsl’ ...
** package ‘gsl’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gsl-config... no
configure: error: gsl-config not found, is GSL installed?
ERROR: configuration failed for package ‘gsl’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/gsl’
Warning in install.packages :
installation of package ‘gsl’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/ll/dvpphrys0pddnjffq7zbl7vm0000gn/T/RtmpRUGsKi/downloaded_packages’
> library(copula)
Error: package or namespace load failed for ‘copula’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘gsl’
Download Homebrew then run
if(!require(pacman)) install.packages("pacman")
pacman::p_load(copula)
seems working for me :)

R Studio error calling installed library on windows : there is no package called 'utf8'

I tried to install package ggplot2in R Studio Desktop Windows. But I got the error message when I used the library :
> install.packages("ggplot2")
Installing package into ‘C:/Users/Rifqi/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.0/ggplot2_3.3.3.zip'
Content type 'application/zip' length 4068844 bytes (3.9 MB)
downloaded 3.9 MB
package ‘ggplot2’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\Rifqi\AppData\Local\Temp\Rtmp005k6i\downloaded_packages
> library(ggplot2)
Error: package or namespace load failed for ‘ggplot2’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘utf8’
>
What should I do to fix this problem?
Install package utf8 and then try reinstall ggplot2 and it should be fixed
install.packages("utf8")

I don't find already installed packages and I'm not able to reinstall..why?

I've always used ggplot2... now R didn't found anymore ggplot2.. so I tried to reinstall the package.. withour success... why??? What should I do?
Also I'm not able to install other packages like lattice extra..
Thank you!
install.packages("ggplot2")
Installing package into ‘C:/Users/vale/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
There is a binary version available but the source version is later:
binary source needs_compilation
ggplot2 3.1.1 3.2.1 FALSE
installing the source package ‘ggplot2’
provo con l'URL 'https://cran.rstudio.com/src/contrib/ggplot2_3.2.1.tar.gz'
Content type 'application/x-gzip' length 3204655 bytes (3.1 MB)
downloaded 3.1 MB
* installing *source* package 'ggplot2' ...
** package 'ggplot2' successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called 'colorspace'
ERROR: lazy loading failed for package 'ggplot2'
* removing 'C:/Users/vale/Documents/R/win-library/3.4/ggplot2'
* restoring previous 'C:/Users/vale/Documents/R/win-library/3.4/ggplot2'
In R CMD INSTALL
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-34~1.3/bin/x64/R" CMD INSTALL -l "C:\Users\vale\Documents\R\win-library\3.4" C:\Users\vale\AppData\Local\Temp\RtmpgHJKyj/downloaded_packages/ggplot2_3.2.1.tar.gz' had status 1
Warning in install.packages :
installation of package ‘ggplot2’ had non-zero exit status
The downloaded source packages are in
‘C:\Users\vale\AppData\Local\Temp\RtmpgHJKyj\downloaded_packages’
> library(ggplot2)
Errore: package or namespace load failed for ‘ggplot2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called ‘colorspace’
> install.packages("latticeExtra")
Installing package into ‘C:/Users/vale/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
Warning in install.packages :
package ‘latticeExtra’ is not available (for R version 3.4.3)
> library(latticeExtra)
Carico il pacchetto richiesto: RColorBrewer
Install the missing colorspace package by executing the following line in R:
install.packages("colorspace")

Unable to load the packages (ex: googlesheets)

I just installed the googlesheets package and later i called the library("googlesheets), but it could not executed and gave the error like :
library(googlesheets)
Error in library(googlesheets) :
there is no package called ‘googlesheets’.
Can any one help here
install.packages("googlesheets")
Installing package into ‘C:/Users/eduru.suresh/Documents/R/win-library/3.3’
(as ‘lib’ is unspecified)
There is a binary version available but the source version is
later:
binary source needs_compilation
googlesheets 0.2.2 0.3.0 FALSE
installing the source package ‘googlesheets’
trying URL 'https://cran.rstudio.com/src/contrib/googlesheets_0.3.0.tar.gz'
Content type 'application/x-gzip' length 2187937 bytes (2.1 MB)
downloaded 2.1 MB
* installing *source* package 'googlesheets' ...
** package 'googlesheets' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called 'pillar'
ERROR: lazy loading failed for package 'googlesheets'
* removing 'C:/Users/eduru.suresh/Documents/R/win-library/3.3/googlesheets'
Warning in install.packages :
running command '"C:/PROGRA~1/R/R-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Users\eduru.suresh\Documents\R\win-library\3.3" C:\Users\EDURU~1.SUR\AppData\Local\Temp\RtmpEB1KKI/downloaded_packages/googlesheets_0.3.0.tar.gz' had status 1
Warning in install.packages :
installation of package ‘googlesheets’ had non-zero exit status
The downloaded source packages are in
‘C:\Users\eduru.suresh\AppData\Local\Temp\RtmpEB1KKI\downloaded_packages’
> library(googlesheets)
Error in library(googlesheets) :
there is no package called ‘googlesheets’

Unable to Install Swirl in "R"

Please help me in installing and loading the swirl package in R.
When I type:
install.packages("swirl")
I get:
Installing package into ‘C:/Users/Abdullah/Documents/R/win-library/3.3' (as ‘lib’ is unspecified)
trying URL 'https://ftp.iitm.ac.in/cran/bin/windows/contrib/3.3/swirl_2.4.2.zip'
Content type 'application/zip' length 212366 bytes (207 KB)
downloaded 207 KB
package ‘swirl’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\Abdullah\AppData\Local\Temp\RtmpeOgzVN\downloaded_packages
The package shows as being installed:
packageVersion("swirl")
[1] ‘2.4.2’
But when I go to load it:
library(swirl)
I receive an error:
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘R6’
Error: package or namespace load failed for ‘swirl’
The error "There is no package called 'R6'" tells you that you need that package installed as well. Running install.packages("R6");library(R6) should take care of that.
The swirl package load the testthat package, which loads the R6 package. Since you don't have R6 installed, you can't load testthat, and you can't load swirl.

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