How to drop minutes in R? - r

I have a DateTime object in R.
tempDateTime<-as.POSIXct("2017-07-13 01:40:00 MDT")
class(tempDateTime)
[1] "POSIXct" "POSIXt"
I would like to drop the minutes from the DateTime object. ie have "2017-07-13 01:00:00 MDT"
Is there a simple way to do this?

In Base R
trunc(tempDateTime, units = "hours")
# "2017-07-13 01:00:00 AEST"
This works because the round function in base R has a method to handle POSIX objects.
From ?round.POSIXt
Round or truncate date-time objects.
As #Thelatemail points out, this returns a POSIXlt object, so you may want to wrap the result in as.POSIXct() again.
Another note, POSIXct is an object that stores the number of seconds since "1970-01-01 00:00:00" (the Unix epoch).
as.numeric(tempDateTime)
# 1499874000
So the manual way to round-down the hours would be
as.POSIXct(floor(as.numeric(tempDateTime) / 3600) * 3600, origin = "1970-01-01")

Try this:
library(lubridate)
> floor_date(tempDateTime, "hour")
[1] "2017-07-13 01:00:00 PDT"

Related

Sys.Date() with as.POSIXct()

Trying to get current date in a POSIXct class. I have tried the following:
as.POSIXct(Sys.Date(), format = "%m/%d/%y", tz = "EST")
and got
[1] "2021-02-12 19:00:00 EST"
and I wish to only get the date without the time but in POSIXct class. For instance:
[1] "2021-02-12"
Convert the Date class object to character first:
as.POSIXct(format(Sys.Date()))
## [1] "2021-02-13 EST"
Even shorter is:
trunc(Sys.time(), "day")
## [1] "2021-02-13 EST"
Note:
POSIXct objects are stored internally as seconds since the Epoch and not as separate date and time so they always have times; however, if the time is midnight as it is here then it does not display when printed using the default formatting.
if you only need the Date it is normally better to use Date class since using POSIXct class can result in subtle time zone errors if you are not careful and there is typically no reason to expose yourself to that potential if you don't need to.
if you change the session's time zone then it won't display without the time because midnight in one time zone is not midnight other time zones.
x <- as.POSIXct(format(Sys.Date()))
x
## [1] "2021-02-13 EST"
# change time zone
Sys.setenv(tz = "GMT")
x
## [1] "2021-02-13 05:00:00 GMT"
# change back
Sys.setenv(tz = "")
x
## [1] "2021-02-13 EST"

System date in Posixlt and Posixct

I am trying to get the last minute of yesterday using Sys.Date() in Posix time.
force_tz(as.POSIXlt(Sys.Date()-1), tz = 'America/New_York') + 86399
# [1] "2018-01-12 23:59:59 EST"
CORRECT
force_tz(as.POSIXct(Sys.Date()-1), tz = 'America/New_York') + 86399
# [1] "2018-01-12 15:59:59 EST"
INCORRECT
Sys.Date()
# [1] "2018-01-13"
Why does as.Posixct and as.Posixlt return two different values using Sys.Date() and why is the difference 8 hours even after applying force_tz from lubridate ?
As ever, debugonce is your friend. Running debugonce(force_tz), you can see that the difference in output comes from when force_tz hits the branches checking first is.POSIXct(time) (in which case the default tzone = "" is applied); in the POSIXlt case, the default branch is hit, where as.POSIXct is applied to time and tz(time) (which comes out as UTC for a POSIXlt object) is used as the time zone.
This comes down to something subtle happening; from ?as.POSIXlt.Date:
Dates without times are treated as being at midnight UTC.
Hence
tz(as.POSIXlt(Sys.Date()-1))
# [1] "UTC"
But
tz(as.POSIXct(Sys.Date()-1))
# [1] ""
What's peculiar is this can't be overridden -- as.POSIXlt.Date doesn't accept a tz argument:
formals(as.POSIXlt.Date)
# $x
# $...
If you want to use POSIXct, how about the following?
force_tz(as.POSIXct(sprintf('%s 00:00:00', Sys.Date())), 'America/New_York') - 1L
# [1] "2018-01-12 23:59:59 EST"

How to get the beginning of the day in POSIXct

My day starts at 2016-03-02 00:00:00. Not 2016-03-02 00:00:01.
How do I get the beginning of the day in POSIXct in local time?
My confusing probably comes from the fact that R sees this as the end-date of 2016-03-01? Given that R uses an ISO 8601?
For example if I try to find the beginning of the day using Sys.Date():
as.POSIXct(Sys.Date(), tz = "CET")
"2016-03-01 01:00:00 CET"
Which is not correct - but are there other ways?
I know I can hack my way out using a simple
as.POSIXct(paste(Sys.Date(), "00:00:00", sep = " "), tz = "CET")
But there has to be a more correct way to do this? Base R preferred.
It's a single command---but you want as.POSIXlt():
R> as.POSIXlt(Sys.Date())
[1] "2016-03-02 UTC"
R> format(as.POSIXlt(Sys.Date()), "%Y-%m-%d %H:%M:%S")
[1] "2016-03-02 00:00:00"
R>
It is only when converting to POSIXct happens that the timezone offset to UTC (six hours for me) enters:
R> as.POSIXct(Sys.Date())
[1] "2016-03-01 18:00:00 CST"
R>
Needless to say by wrapping both you get the desired type and value:
R> as.POSIXct(as.POSIXlt(Sys.Date()))
[1] "2016-03-02 UTC"
R>
Filed under once again no need for lubridate or other non-Base R packages.
Notwithstanding that you understandably prefer base R, a "smart way," for certain meaning of "smart," would be:
library(lubridate)
x <- floor_date(Sys.Date(),"day")
> format(x,"%Y-%m-%d-%H-%M-%S")
[1] "2016-03-02-00-00-00"
From ?floor_date:
floor_date takes a date-time object and rounds it down to the nearest
integer value of the specified time unit.
Pretty handy.
Your example is a bit unclear.
You are talking about a 1 minute difference for the day start, but your example shows a 1 hour difference due to the timezone.
You can try
?POSIXct
to get the functionality explained.
Using Sys.Date() withing POSIXct somehow overwrites your timezone setting.
as.POSIXct(Sys.Date(), tz="EET")
"2016-03-01 01:00:00 CET"
While entering a string gives you
as.POSIXct("2016-03-01 00:00:00", tz="EET")
"2016-03-01 EET"
It looks like 00:00:00 is actually the beginning of the day. You can conclude it from the results of the following 2 inequalities
as.POSIXct("2016-03-02 00:00:02 CET")>as.POSIXct("2016-03-02 00:00:01 CET")
TRUE
as.POSIXct("2016-03-02 00:00:01 CET")>as.POSIXct("2016-03-02 00:00:00 CET")
TRUE
So somehow this is a timezone issue. Notice that 00:00:00 is automatically removed from the as.POSIXct result.
as.POSIXct("2016-03-02 00:00:00 CET")
"2016-03-02 CET"

Modifying timezone of a POSIXct object without changing the display

I have a POSIXct object and would like to change it's tz attribute WITHOUT R to interpret it (interpret it would mean to change how the datetime is displayed on the screen).
Some background: I am using the fasttime package from S.Urbanek, which take strings and cast it to POSIXct very quickly. Problem is that the string should represent a datetime in "GMT" and it's not the case of my data.
I end up with a POSIXct object with tz=GMT, in reality it is tz=GMT+1, if I change the timezone with
attr(datetime, "tzone") <- "Europe/Paris";
datetime <- .POSIXct(datetime,tz="Europe/Paris");
then it will be "displayed" as GMT+2 (the underlying value never change).
EDIT: Here is an example
datetime=as.POSIXct("2011-01-01 12:32:23.234",tz="GMT")
attributes(datetime)
#$tzone
#[1] "GMT"
datetime
#[1] "2011-01-01 12:32:23.233 GMT"
How can I change this attribute without R to interpret it aka how can I change tzone and still have datetime displayed as "2011-01-01 12:32:23.233" ?
EDIT/SOLUTION, #GSee's solution is reasonably fast, lubridate::force_tz very slow
datetime=rep(as.POSIXct("2011-01-01 12:32:23.234",tz="GMT"),1e5)
f <- function(x,tz) return(as.POSIXct(as.numeric(x), origin="1970-01-01", tz=tz))
> system.time(datetime2 <- f(datetime,"Europe/Paris"))
user system elapsed
0.01 0.00 0.02
> system.time(datetime3 <- force_tz(datetime,"Europe/Paris"))
user system elapsed
5.94 0.02 5.98
identical(datetime2,datetime3)
[1] TRUE
To change the tz attribute of a POSIXct variable it is not best practice to convert to character or numeric and then back to POSIXct. Instead you could use the force_tz function of the lubridate package
library(lubridate)
datetime2 <- force_tz(datetime, tzone = "CET")
datetime2
attributes(datetime2)
EDITED:
My previous solution was passing a character value to origin (i.e.origin="1970-01-01"). That only worked here because of a bug (#PR14973) that has now been fixed in R-devel.
origin was being coerced to POSIXct using the tz argument of the as.POSIXct call, and not "GMT" as it was documented to do. The behavior has been changed to match the documentation which, in this case, means that you have to specify your timezone for both the origin and the as.POSIXct call.
datetime
#[1] "2011-01-01 12:32:23.233 GMT"
as.POSIXct(as.numeric(datetime), origin=as.POSIXct("1970-01-01", tz="Europe/Paris"),
tz="Europe/Paris")
#[1] "2011-01-01 12:32:23.233 CET"
This will also works in older versions of R.
An alternative to the lubridate package is via conversion to and back from character type:
recastTimezone.POSIXct <- function(x, tz) return(
as.POSIXct(as.character(x), origin = as.POSIXct("1970-01-01"), tz = tz))
(Adapted from GSee's answer)
Don't know if this is efficient, but it would work for time zones with daylight savings.
Test code:
x <- as.POSIXct('2003-01-03 14:00:00', tz = 'Etc/UTC')
x
recastTimezone.POSIXct(x, tz = 'Australia/Melbourne')
Output:
[1] "2003-01-03 14:00:00 UTC"
[1] "2003-01-03 14:00:00 AEDT" # Nothing is changed apart from the time zone.
Output if I replaced as.character() by as.numeric() (as GSee had done):
[1] "2003-01-03 14:00:00 UTC"
[1] "2003-01-03 15:00:00 AEDT" # An hour is added.

Create a regular sequence of date-times (POSIXct) using seq()

My goal is to create a vector of POSIXct time stamps given a start, an end and a delta (15min, 1hour, 1day). I hoped I could use seq for this, but I have a problem converting between the numeric and POSIXct representation:
now <- Sys.time()
now
# [1] "2012-01-19 10:30:39 CET"
as.POSIXct(as.double(now), origin="1970-01-01", tz="CET")
# [1] "2012-01-19 09:30:39 CET"
as.POSIXct(as.double(now), origin=as.POSIXct("1970-01-01", tz="CET"), tz="CET")
# [1] "2012-01-19 09:30:39 CET"
One hour gets lost during this conversion. What am I doing wrong?
There is a seq() method for objects of class "POSIXt" which is the super class of the "POSIXlt" and "POSIXct" classes. As such you don't need to do any conversion.
> now <- Sys.time()
> tseq <- seq(from = now, length.out = 100, by = "mins")
> length(tseq)
[1] 100
> head(tseq)
[1] "2012-01-19 10:52:38 GMT" "2012-01-19 10:53:38 GMT"
[3] "2012-01-19 10:54:38 GMT" "2012-01-19 10:55:38 GMT"
[5] "2012-01-19 10:56:38 GMT" "2012-01-19 10:57:38 GMT"
You have to be aware that when converting from POSIXct to numeric, R takes the timezone into account but always starts counting from a GMT origin :
> xgmt <- as.POSIXct('2011-01-01 14:00:00',tz='GMT')
> xest <- as.POSIXct('2011-01-01 14:00:00',tz='EST')
> (as.numeric(xgmt) - as.numeric(xest)) / 3600
[1] -5
As you see, the time in EST is conceived to be five hours earlier than the time in GMT, which is the time difference between both timezones. It's that value that is saved internally.
The as.POSIXCT() function just adds an attribute containing the timezone. It doesn't alter the value, so you get the time presented in GMT time, but with an attribute telling it is EST. This also means that once you go from POSIXct to numeric, you should treat your data as if it's GMT time. (It's a whole lot more complex than that, but it's the general idea). So you have to calculate the offset as follows:
> nest <- as.numeric(xest)
> origin <- as.POSIXct('1970-01-01 00:00:00',tz='EST')
> offset <- as.numeric(origin)
> as.POSIXct(nest-offset,origin=origin)
[1] "2011-01-01 14:00:00 EST"
This works whatever the timezone is in your locale (in my case, that's actually CET). Also note that behaviour of timezone data can differ between systems.
These time zone issues are always fiddly, but I think the problem is that your origin is being calculated in the wrong time zone (since the string only specifies the date).
Try using origin <- now - as.numeric(now).
Alternatively, use lubridate::origin, which is the string "1970-01-01 UTC".
A full solution, again using lubridate.
start <- now()
seq(start, start + days(3), by = "15 min")
I do not have an answer to your problem, but I do have an alternative way of creating vectors of POSIXct objects. If, for example, you want to create a vector of 1000 timestamps from now with a delta_t of 15 minutes:
now = Sys.time()
dt = 15 * 60 # in seconds
timestamps = now + seq(0, 1000) * dt
> head(timestamps)
[1] "2012-01-19 11:17:46 CET" "2012-01-19 11:32:46 CET"
[3] "2012-01-19 11:47:46 CET" "2012-01-19 12:02:46 CET"
[5] "2012-01-19 12:17:46 CET" "2012-01-19 12:32:46 CET"
The trick is you can add a vector of seconds to a POSIXct object.
An alternative to using seq.POSIXt is xts::timeBasedSeq, which allows you to specify the sequence as a string:
library(xts)
now <- Sys.time()
timeBasedSeq(paste("2012-01-01/",format(now),"/H",sep="")) # Hourly steps
timeBasedSeq(paste("2012-01-01/",format(now),"/d",sep="")) # Daily steps
You need to use seq(from=start,to=end, by=step). Note that in step you can either use "days" or an integer defining how many seconds elapse from item to item.

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