I'm trying to install a package from github for R with devtools package.
But I'm encountering Timeout error from curl each time!
install_github('ramhiser/datamicroarray')
Error in curl::curl_fetch_disk(url, x$path, handle = handle) :
Timeout was reached
Any Idea why this happens? Any help will be appreciated.
When I want to download this package it also takes long to get a connection but in the end it works as expected. Another possibility is to download the zip file and then install it.
To install the package after downloading, the following code works:
install.packages("/address/to/zip-package", repos = NULL, type="source")
and write the address of the downloaded package in place of /address/to/zip-package, or use RStudio and Packages -> Install.
Related
So I am going to do some survivalsvm process and I need the mlr3extralearners package from GitHub. When I tried to install it locally using the tar.gz file, it said
Execution halted
Warning in install.packages: installation of package had non-zero exit status
I also tried to use the zip file, and it said
install.packages("C:/Users/Ivan/Downloads/mlr3extralearners-0.5.49.zip", repos = NULL, type = "win.binary", lib="C:/R-4.2.1/library")
then nothing happened.
I also tried using devtools::install_github("mlr-org/mlr3extralearners"), but the output was the same when I used the tar.gz file. When I checked in my library, I already have the mlr3extralearners package, but when I call it using library(mlr3extralearners), it does not work. Does anyone know how to solve this? Any help is appreciated.
https://rdrr.io/github/mlr-org/mlr3extralearners/
I believe this should work for you:
Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("mlr-org/mlr3extralearners")
I am trying to create clustered box plots in R. Everything about my code seems on track, but when I try to run it I get the error warning
"Error in loadNamespace(name) : there is no package called ‘digest’.
When I try to download the package digest in the R package Installer I get a bunch of errors stating that the download of digest failed.
How do I get the digest package, OR is there a way to do clustered box plots without this? Thanks!
I had the same problem with install.packages("digest") on OS10.11.6 (running with the defaults). But it worked by specifying the repos:
install.packages('digest', repos='http://cran.us.r-project.org')
I had a similar error message recently and managed to solve the problem by downloading the tar.gz file directly from the CRAN Repository (see https://cran.r-project.org/web/packages/digest/index.html and download "digest_0.6.15.tar.gz") and then you can install it in RStudio (Tools -> Install Packages -> Install from Package/Archive File).
I'm trying to download library 'quantmod' in R:
install.packages("quantmod")
console:
The downloaded source packages are in
‘/tmp/RtmpwSKGIl/downloaded_packages’
then:
library("quantmod", lib.loc="/tmp/RtmpwSKGIl/downloaded_packages")
console:
Error in library("quantmod", lib.loc = "/tmp/RtmpwSKGIl/downloaded_packages") :
there is no package called ‘quantmod’
What is the problem?
I get no problem when I try to load this package.Have you tried to provide R the full name path to your package file directory ?C:/Users/...Is your R version up to date ? Try to check if you have the latest, I tried and it worked with :
R 3.3.3
If you are a Windows or MAC user you might want to force the download of the package from source to binary, this can be done by setting the right options in the install.packages command:
options(install.packages.check.source = "no")
https://stat.ethz.ch/R-manual/R-devel/library/utils/html/install.packages.html
I guess I am a year late, but just got out of this situation by installing the Package from R (instead of RStudio) by changing the CRAN.
You can then run library(quantmod) in Rstudio. Hope this works(worked?) for you too.
I am ready to go now!
I am currently trying to install the gganimate package but seem unable to.
I am running Win 10, Rx64 3.3.0 and Rstudio 0.99.896;
the following command:
devtools::install_github("dgrtwo/gganimate")
will throw this error:
Downloading GitHub repo dgrtwo/gganimate#master
from URL https://api.github.com/repos/dgrtwo/gganimate/zipball/master
Error in curl::curl_fetch_memory(url, handle = handle) :
Problem with the SSL CA cert (path? access rights?)
So after a few hours of despair, I decided to try and install the package manually. I followed this link:
here
the following command:
install.packages(pkgs = "C:/Users/Superzucca/Desktop/gganimate-master.zip", repos = NULL)
results in:
Installing package into ‘C:/Users/Superzucca/Documents/R/win-library/3.3’
(as ‘lib’ is unspecified)
but then when I call:
library("gganimate-master") #### -> as suggsted by R itself!!
this error is thrown:
Error in library("gganimate-master") : there is no package called ‘gganimate-master’
please, help. I don't have any problems installing other pkgs and honestly don't know what else to try.
Thank you in advance,
Superzucca
Try out this. It's working for me.
library(devtools)
library(RCurl)
library(httr)
set_config( config( ssl_verifypeer = 0L ) )
devtools::install_github("dgrtwo/gganimate")
Figured out the problem, updating with an answer if anybody in the future might need it.
this LINK to another SO question partially solved my problem;
I also had to add R, Rstudio and the library folder to my AntiVirus' excption list, and of course running as administrator :)
I had the same problem like you but I was successful at last.
Generally, you have to deal with two issues: first, connecting to github; second, installing both Rcpp and gganimate.
library(devtools)
library(RCurl)
library(httr)
set_config( config( ssl_verifypeer = 0L ) )
devtools::install_github("RcppCore/Rcpp")
devtools::install_github("dgrtwo/gganimate")
Try the following:
install.packages("gganimate")
Note: This will depend on the version of R installed and if you are downloading from the Cran site.
I am not able to work in swirl package in R. I am able to install the swirl
package correctly. But while giving the library("swirl") command the error comes up.I have tried every thing like I am not able to find the answer of this error on internet. I have reinstalled R complete. I have tried changing directory. But still this error message is coming. Please help.This is the error message:
library("swirl")
Error in get(Info[i, 1], envir = env) :
cannot open file
'C:/Users/Devender/Documents/R/win-library/3.2/httr/R/httr.rdb': No such
file or directory
Error: package or namespace load failed for ‘swirl’
Thanks alot in advance
Try installing httr package. I think it will solve your problem.
You did not say which R version you are using.
Some Swirl packages are not available for few R versions as 3.2.2. You cant even download any courses from Github repositories into the Swirl if Swirl was successfully loaded in R.
You may want to re-install a different version of R to avoid this Swirl issue, and try again.