I'm trying to load the BiodiversityR package and getting the following error and warning messages:
library(BiodiversityR)
Loading required package: tcltk
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘pbkrtest’ 0.4-2 is being loaded, but >= 0.4.4 is required
In addition: Warning message:
package ‘BiodiversityR’ was built under R version 3.2.5
Error: package or namespace load failed for ‘BiodiversityR’
I don't understand what it means/what I need to do to fix it. Can anyone please help? Thank you!
The relevant part of the error message is this:
Error … :
namespace ‘pbkrtest’ 0.4-2 is being loaded, but >= 0.4.4 is required
— Your package (indirectly) depends on another package called ‘pbkrtest’. This package is installed but apparently outdated. You need to reinstall it using install.packages('pbkrtest').
The additional warning message gives a hint about the source of this error: you updated R after installing some packages. You may need to reinstall all packages after upgrading R. In fact, the warning suggests that it’s probably a good idea to also reinstall the ‘BiodiversityR’.
Related
I have written my code a-2 months ago and i try to reuse it, but the installation of packages fails and i become this warning:
install.packages("devtools")
library("devtools")
> library("devtools")
Loading required package: usethis
Error: package or namespace load failed for ‘usethis’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘cli’ 3.3.0 is already loaded, but >= 3.4.0 is required
Error: package ‘usethis’ could not be loaded
Although i reinstalled RStudio and R, tried to upadte all packages and install all their dependencies etc, it fails to install the updates/packages. Do you have any idea? Thank you in advance.
first you need to check from bottom right (Packages) and search for devtools if you found check if installed or not, also you can write ?devtools to see if help page show up for Package development tools for R, if you want to use the package you can write devtools:: and follow it with the name of function.
I am having problems with ggplot, getting the above error message.See full error message below after running library(ggplot2):
Error: package or namespace load failed for 'ggplot2' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
'vctrs' package 0.3.6 is already loaded, but >= 0.3.8 is required
Also: Warning message:
package 'ggplot2' was compiled with R 4.0.5
I have tried removing the package and then reinstalling it with dependencies. Nothing seems to work. The error seems to have been triggered when I tried to do an install of the ggflags package from Github, the package info states that it is a ggplot extension. Please give me an idea of how to fix this because I use ggplot for all data viz in R
Try the following shotgun-approach, as I suspect you are missing relevant packages,
# remove packages
remove.packages("tidyverse")
# reinstall
install.packages("tidyverse", dependencies = TRUE)
If this does not work, you should post your sessionInfo() in your post.
When I attempt to open up the Tidyverse library after installing the package, the following error messages comes:
>library(tidyverse)
Error: package or namespace load failed for ‘tidyverse’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called ‘colorspace’
In addition: Warning message:
package ‘tidyverse’ was built under R version 3.6.3
I also tried to install the package color space using
install.packages("colorspace")
Exact same error messages shows as above. Please help!
p.sp. I installed Rtools40.
You can try install.packages("scales").
You can also check for the newest version using the update button in Rstudio.
I've had the following error for the package Hmisc. I read another thread which asked more about the error message however it said not to post this as a comment. I've installed the package and received the following error when calling in the library:
> library(Hmisc)
Error: package or namespace load failed for ‘Hmisc’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called ‘checkmate’
In addition: Warning message:
package ‘Hmisc’ was built under R version 3.4.4
I've tried deleting the install and then installing checkmate separately and manually installing this from a browser rather than through R directly. However the same error message is returning. Does anyone know how to overcome this? Or similar packages to Hmisc. I need to package for a wtd.quantile function.
install.packages('lattice')
library('lattice')
install.packages('survival')
library('survival')
install.packages('Formula')
library('Formula')
install.packages('ggplot2')
library('ggplot2')
install.packages('checkmate')
library('checkmate')
install.packages('htmlwidgets')
library('htmlwidgets')
install.packages('stringi')
library('stringi')
install.packages('Hmisc')
library('Hmisc')
I'm using R-3.3.3. I tried to install package tm using following commands
install.packages('tm',dependencies = TRUE)
library('tm')
But I'm getting error message
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘slam’
In addition: Warning message:
package ‘tm’ was built under R version 3.3.3
Error: package or namespace load failed for ‘tm’
I saw two solutions for same type of error here & dependency ‘slam’ is not available when installing TM package. I tried those two but I'm getting error message like
Installation failed: Could not find build tools necessary to build slam.
Kindly suggest me how to install tm package in R-3.3.3
I faced the same problem today, after testing many ways to solve it I could find the following command that can install the tm package, sorry I know it is very late but still useful.
require(devtools)
install_version("tm", version = "0.7-1", repos = "http://cran.us.r-project.org")