Storm Error: backtype.storm.multilang.NoOutputException: Pipe to subprocess seems to be broken! No output read - r

Question

I am running a storm topology on a local cluster and it works fine for about an hour and then it stops after throwing this error.
backtype.storm.multilang.NoOutputException: Pipe to subprocess seems to be broken! No output read.
The entire error trace is:
ERROR b.s.t.ShellBolt - Halting process: ShellBolt died. Command: [Rscript, stormtest_with_OR1.R], ProcessInfo pid:32381, name:RBolt exitCode:-1, errorString:
java.lang.RuntimeException: backtype.storm.multilang.NoOutputException: Pipe to subprocess seems to be broken! No output read.
Serializer Exception:
at backtype.storm.utils.ShellProcess.readShellMsg(ShellProcess.java:101) ~[storm-core-0.10.0.jar:0.10.0]
at backtype.storm.task.ShellBolt$BoltReaderRunnable.run(ShellBolt.java:321) [storm-core-0.10.0.jar:0.10.0]
at java.lang.Thread.run(Thread.java:745) [?:1.7.0_67]
2016-04-05 11:07:04,665 FATAL Unable to register shutdown hook because JVM is shutting down.
51144 [Thread-14-RBolt] ERROR b.s.util - Halting process: ("Worker died")
java.lang.RuntimeException: ("Worker died")
at backtype.storm.util$exit_process_BANG_.doInvoke(util.clj:336) [storm-core-0.10.0.jar:0.10.0]
at clojure.lang.RestFn.invoke(RestFn.java:423) [clojure-1.6.0.jar:?]
at backtype.storm.daemon.worker$fn__7184$fn__7185.invoke(worker.clj:532) [storm-core-0.10.0.jar:0.10.0]
at backtype.storm.daemon.executor$mk_executor_data$fn__5523$fn__5524.invoke(executor.clj:261) [storm-core-0.10.0.jar:0.10.0]
at backtype.storm.util$async_loop$fn__545.invoke(util.clj:489) [storm-core-0.10.0.jar:0.10.0]
at clojure.lang.AFn.run(AFn.java:22) [clojure-1.6.0.jar:?]
at java.lang.Thread.run(Thread.java:745) [?:1.7.0_67]
The Bolt is written in R. In my topology code the cluster.shutdown() is commented which has been cited as the reason for this error in many threads related to this error.