I'm new to R and cassandra, I'm trying to install the rcassandra package. On the rforge.net site, it says to do:
> install.packages('RCassandra',,'http://www.rforge.net/')
Warning: unable to access index for repository http://www.rforge.net/src/contrib
Warning message:
package ‘RCassandra’ is not available (for R version 3.1.0)
Trying a different repository
> install.packages('RCassandra',repo='http://cran.cnr.Berkeley.edu/')
Installing package into ‘/home/as/R/x86_64-redhat-linux-gnu-library/3.1’
(as ‘lib’ is unspecified)
Warning: unable to access index for repository http://cran.cnr.Berkeley.edu/src/contrib/
Warning message:
package ‘RCassandra’ is not available (for R version 3.1.0)
I tried installing from command line, but that does'nt seem to work either:
> sudo R CMD INSTALL RCassandra_0.1\-3.tar.gz
* installing to library ‘/home/as/R/x86_64-redhat-linux-gnu-library/3.1’
* installing *source* package ‘RCassandra’ ...
** package ‘RCassandra’ successfully unpacked and MD5 sums checked
** libs
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c cass.c -o cass.o
cass.c:1: sorry, unimplemented: 64-bit mode not compiled in
make: *** [cass.o] Error 1
ERROR: compilation failed for package ‘RCassandra’
* removing ‘/home/as/R/x86_64-redhat-linux-gnu-library/3.1/RCassandra
So how do I install the package? I can see the package on the web sites
Related
I am new to learning R and i get the following error while installing the package called 'hemp'. Its a package which is used in psychometric analysis. Can anyone tell me what causes this errror?
Downloading GitHub repo cddesja/hemp#master
Installing 1 packages: nloptr
Installing package into ‘C:/Users/UJJWAL/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
There is a binary version available but the
source version is later:
binary source needs_compilation
nloptr 1.2.2.1 1.2.2.2 TRUE
installing the source package ‘nloptr’
trying URL 'https://cran.rstudio.com/src/contrib/nloptr_1.2.2.2.tar.gz'
Content type 'application/x-gzip' length 2450931 bytes (2.3 MB)
downloaded 2.3 MB
* installing *source* package 'nloptr' ...
** package 'nloptr' successfully unpacked and MD5 sums checked
** using staged installation
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
*** arch - i386
/mingw32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-4.0.2/include" -DNDEBUG -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dummy.cpp -o dummy.o
/mingw32/bin/gcc -I"C:/PROGRA~1/R/R-4.0.2/include" -DNDEBUG -I"/i386/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c init_nloptr.c -o init_nloptr.o
init_nloptr.c:35:10: fatal error: nlopt.h: No such file or directory
#include "nlopt.h"
^~~~~~~~~
compilation terminated.
make: *** [C:/PROGRA~1/R/R-4.0.2/etc/i386/Makeconf:222: init_nloptr.o] Error 1
ERROR: compilation failed for package 'nloptr'
* removing 'C:/Users/UJJWAL/Documents/R/win-library/4.0/nloptr'
Error: Failed to install 'hemp' from GitHub:
(converted from warning) installation of package ‘nloptr’ had non-zero exit status
Seems that it wouldbe a little harder to install nloptr on Windows. It require nlopt to be installed first. See this for more info: https://www.r-project.org/nosvn/pandoc/nloptr.html
I am trying to install package "tm" and get an error (see below). From this error I can't see what is going wrong. Package Rcpp is installed. Working on R 3.4.0, Xubuntu 64.
How can I install package tm?
* installing *source* package ‘tm’ ...
** package ‘tm’ successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/share/R/include -DNDEBUG -I"/home/henk/R/x86_64-pc-linux-gnu-library/3.4/BH/include" -I"/home/henk/R/x86_64-pc-linux-gnu-library/3.4/Rcpp/include" -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
In file included from /home/henk/R/x86_64-pc-linux-gnu-library/3.4/Rcpp/include/Rcpp.h:34:0,
from RcppExports.cpp:4:
/home/henk/R/x86_64-pc-linux-gnu-library/3.4/Rcpp/include/Rcpp/grow.h:73:47: fatal error: Rcpp/generated/grow__pairlist.h: No such file or directory
compilation terminated.
/usr/lib/R/etc/Makeconf:168: recipe for target 'RcppExports.o' failed
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘tm’
* removing ‘/home/henk/R/x86_64-pc-linux-gnu-library/3.4/tm’
Warning in install.packages :
installation of package 'tm' had non-zero exit status
The downloaded source packages are in
'/tmp/Rtmp3tKSat/downloaded_packages'
At first we can install "devtools" packages and than install "tm"
by using devtools::install_cran("tm")
try
sudo apt-get install r-cran-rcpp
I have a 5 node BigInsights hadoop cluster in Bluemix. I am getting error, when I am trying to install H2O ai R in BigInsights cluster.
install.packages("h2o", type="source", repos=(c("http://h2o-release.s3.amazonaws.com/h2o/rel-turing/3/R")))
ERROR: dependencies ‘statmod’, ‘RCurl’, ‘jsonlite’ are not available for package ‘h2o’
* removing ‘/home/opus/R/x86_64-redhat-linux-gnu-library/3.3/h2o’
The downloaded source packages are in
‘/tmp/RtmpJmcuyB/downloaded_packages’
Warning message:
In install.packages("h2o", type = "source", repos = (c("http://h2o-release.s3.amazonaws.com/h2o/rel-turing/3/R"))) :
installation of package ‘h2o’ had non-zero exit status
When I try to install 'RCurl' package of R in BigInsights cluster, getting the error message as:
trying URL 'https://cran.fhcrc.org/src/contrib/RCurl_1.95-4.8.tar.gz'
Content type 'application/x-gzip' length 916934 bytes (895 KB)
==================================================
downloaded 895 KB
* installing *source* package ‘bitops’ ...
** package ‘bitops’ successfully unpacked and MD5 sums checked
** libs
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c bit-ops.c -o bit-ops.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c cksum.c -o cksum.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -o bitops.so bit-ops.o cksum.o -L/usr/lib64/R/lib -lR
installing to /home/opus/R/x86_64-redhat-linux-gnu-library/3.3/bitops/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
converting help for package ‘bitops’
finding HTML links ... done
bitAnd html
bitFlip html
bitShiftL html
cksum html
** building package indices
** testing if installed package can be loaded
* DONE (bitops)
* installing *source* package ‘RCurl’ ...
** package ‘RCurl’ successfully unpacked and MD5 sums checked
checking for curl-config... no
Cannot find curl-config
ERROR: configuration failed for package ‘RCurl’
* removing ‘/home/opus/R/x86_64-redhat-linux-gnu-library/3.3/RCurl’
The downloaded source packages are in
‘/tmp/RtmpJmcuyB/downloaded_packages’
Warning message:
In install.packages("RCurl") :
installation of package ‘RCurl’ had non-zero exit status
Please help me to resolve the issue and help would be much appreciated.
It looks like you are trying to install on Linux.
You need to install the development files for libcurl first.
eg
apt-get install libcurl4-openssl-dev
or
yum install libcurl-devel
install.packages('forecast')
Installing package into ‘/usr/lib64/R/library’
(as ‘lib’ is unspecified)
trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/forecast_5.4.tar.gz'
Content type 'application/x-gzip' length 150965 bytes (147 Kb)
opened URL
downloaded 147 Kb
installing source package ‘forecast’ ...
package ‘forecast’ successfully unpacked and MD5 sums checked
libs
g++ -m64 -I/usr/include/R -DNDEBUG -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -I"/usr/lib64/R/library/RcppArmadillo/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c calcBATS.cpp -o calcBATS.o
In file included from calcBATS.cpp:1:0:
calcBATS.h:36:27: fatal error: RcppArmadillo.h: No such file or directory
#include
^
compilation terminated.
make: * [calcBATS.o] Error 1
ERROR: compilation failed for package ‘forecast’
* removing ‘/usr/lib64/R/library/forecast’
The downloaded source packages are in
‘/tmp/RtmpJRX18M/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning message:
In install.packages("forecast") :
installation of package ‘forecast’ had non-zero exit status
Looks like there is a missing package dependence, RcppArmadillo.
install.packages("RcppArmadillo")
Then:
install.packages('forecast')
add within your lifecycle configuration
conda install -y -c r r-forecast
I am trying to build the R package png, the repo says that libpng needs to be available.
I run a Linux Fedora 20 distro
Looks like I have it...
[root#localhost bin]# yum install libpng
Loaded plugins: langpacks, refresh-packagekit
Package 2:libpng-1.6.3-3.fc20.x86_64 already installed and latest version
Nothing to do
But when I try to install it:
> install.packages("png")
Installing package into ‘/home/statquant/R/x86_64-redhat-linux-gnu-library/3.0’
(as ‘lib’ is unspecified)
trying URL 'http://cran.rstudio.com/src/contrib/png_0.1-7.tar.gz'
Content type 'application/x-gzip' length 24990 bytes (24 Kb)
opened URL
==================================================
downloaded 24 Kb
* installing *source* package ‘png’ ...
** package ‘png’ successfully unpacked and MD5 sums checked
** libs
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/local/include `libpng-config --cflags` -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -c read.c -o read.o
/bin/sh: libpng-config: command not found
read.c:3:17: fatal error: png.h: No such file or directory
#include <png.h>
^
compilation terminated.
make: *** [read.o] Error 1
ERROR: compilation failed for package ‘png’
* removing ‘/home/statquant/R/x86_64-redhat-linux-gnu-library/3.0/png’
The downloaded source packages are in
‘/tmp/RtmpG5MjG9/downloaded_packages’
Warning message:
In install.packages("png") :
installation of package ‘png’ had non-zero exit status
For some R packages you need the corresponding development library to successfully install the R package. In your case this should do what you need
# Do the following in your terminal (not in an R session)
yum install libpng-devel
afterwards you should be able to install the R package
# Do the following in the R console (during an R session)
install.packages("png")
I had the same problem on Ubuntu (16.04) and solved it using
sudo apt-get install libpng-dev