I tried this:
z <- zscore(NMEBXTP_MeanDepth, na.rm=TRUE)
and got this:
Error: could not find function "zscore"
So I did this:
install.packages(c("R.basic"), contriburl="http://www.braju.com/R/repos/")
And got this:
Warning: unable to access index for repository http://www.braju.com/R/repos/
Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
package ‘R.basic’ is not available
Besides being dysbinarylexic whats my problem?
Did you load the package for use before trying to use it? You need
library("R.basic")
or
require("R.basic")
to actually load the package functions into the running R session for you to be able to use them.
If you don't actually have it installed at all, then something looks amiss with the repository. If we look here we see that R.basic has been deprecated and is not on CRAN. Further, the page tells us that many of the R.basic are in the R.utils and aroma.light packages, both of which are on CRAN. Take a look at the CRAN pages for R.utils and aroma.light to see which one you need for the functionality you wanted to use.
If the problem installing from that repository continues, contact the maintainer of the repository to report the problem.
Related
I try install TreeLS package, but i receive this message.
install.packages("TreeLS")
Message:
Installing package into ‘C:/Users/Matheus Pacheco/AppData/Local/R/win-library/4.2’
Warning in install.packages :
package ‘TreeLS’ is not available for this version of R
A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages
I found that the package is not present in CRAN anymore, and i try install from source, using:
install.packages("TreeLS", repos = "https://cran.r-project.org/src/contrib/Archive/TreeLS/TreeLS_2.0.2.tar.gz", repo = NULL, type="source")
But, some functions in the package, doesn't work.
I would be grateful if someone can help me. My final paper in PhD depends on it.
Thanks!
I'm afraid that if you're using a retired package, there is little help to get unless you try to fix it yourself. The question become too general.
But, some functions in the package, doesn't work.
Contact package developer, there is probably another package that include what you need, or his code might have been moved into some other package. He/She would know.
Perhaps someone can help you if you pull out the parts you need.
last resort (not recommend), downgrade to a compatible R version.
I am tying to get the rela package installed on my home computer. When trying install.packages("rela") I get a message:
A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages
Haven't been able to find much help through online resources.
Try remotes::install_version("rela", version="4.1") (you'll have to install.packages("remotes") first).
First, try to download one of the versions of the package: https://cran.r-project.org/src/contrib/Archive/rela/
Then, install the package by providing the path of the .tar.gz file downloaded
I am trying to load a package in RStudio from GitHub but I get an error.
I have also updated all the packages in order to see if this was the problem but I still get the same error. I have a MAC pc (I don't know if this may cause some problems).
The link of the package that I would like to load is:
https://github.com/andrewraim/COMMultReg
and there is written that in order to load it I need to run
library(devtools)
install_github("andrewraim/COMMultReg")
But when I run the second line I get as error:
** building package indices
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘COMMultReg’ in namespaceExport(ns, exports):
undefined exports: d_cmb, d_cmb_sample, d_cmm, d_cmm_sample, gunterize, loglik_score_fim_cmm, normconst_cmb, normconst_cmm, r_cmb
Errore: loading failed
Esecuzione interrotta
ERROR: loading failed
* removing ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/COMMultReg’
Warning message:
In i.p(...) :
installation of package ‘/var/folders/n0/4lmr1lrj7qqfylmh6s8qx0nr0000gn/T//RtmpldrmHr/file72e1e4469d/COMMultReg_0.1.0.tar.gz’ had non-zero exit status
Can somebody help me telling me what to do?
Thanks!!
The package has no function named d_cmb, but it tries to export that function. That's what the error message says, and it's true.
I think the reason for this error is that the author used Roxygen2 to generate his NAMESPACE file where the exports are declared, but that file is out of sync with the contents of the package.
It's possible this happened because the author forgot to commit a new file containing the new code. In that case, the best solution is to contact the author, and point out the issue.
Alternatively, it may have happened because at one time there was a d_cmb function, but the author removed it, without updating the NAMESPACE file. This one you might be able to fix yourself.
To fix this, you'll need to run Roxygen2 yourself, which is a little more complicated than just installing what's on Github. Here are the steps:
Fork the package to your own Github account if you have one. (This step is optional, but it makes some later steps easier.)
Download the source for the package. In RStudio, the quickest way to do this is to create a new project using Version Control, Git, and give the URL
of your forked copy, or the original URL if you skipped that.
Run Roxygen2 on the package. In RStudio, you do this by choosing "Document" in the "More" menu of the Build tab.
Try to build it. If you're lucky, it will now build properly. If not, fix the next problem.
This is very important: send your changes back to the original author. If you forked the package, this is easy; if not, figure out a way to do it.
this is the maintainer of the COMMultReg package. I didn't know about this thread until now, but it sounds like you were able to get started from the answer by user2554330.
The functions d_cmb, d_cmb_sample, etc are supposed to be exported. I think the problem may have been that, at the time of the question, I did not have src/RcppExports.cpp and R/RcppExports.R checked into Github. This seems to be necessary to use install_github on a package with exported Rcpp functions. Those were checked in around 8 months ago. (Coincidentally not long after this question was posted?)
Please let me know if you still having trouble with the install. Otherwise, enjoy the package!
I'm new to R so I hope this isn't incredibly obvious. I created a package that contains two functions. I provided documentation using roxygen2 for each of the functions, documented and built the package as well as installed and restarted multiple times. I also pushed it up to github and have done everything I can think of to do, yet I cannot access the help files that I created. I always receive this error:
No documentation for ‘myfunc’ in specified packages and libraries: you
could try ‘??myfunc’
Not only is ?myfunc not working, but when I attempt to install my own package to my own RStudio console, but I also receive this error:
Warning in install.packages : package ‘yourpackage*’ is not
available (for R version 3.6.1)
What exactly is going wrong here, and how can I attempt to fix it? I've built packages before and this time I've followed all the same steps I've been taught to use and have used in the past, but for some reason, I'm being met with these errors. I would appreciate any and all help you all have to offer. Thank you in advance!
I want to install a package named "locClass" in R but always failed and kept getting the following warning:
install.packages("locClass", repos="http://download.r-forge.r-project.org/")
Package which is only available in source form, and may need compilation of C/C++/Fortran: ‘locClass’
These will not be installed
The install command is referred to: https://r-forge.r-project.org/R/?group_id=1187
Also, I downloaded the package source from the above website. But R returned the following:
library(locClass)
Error in library(locClass) : ‘locClass’ is not a valid installed package
My R version is 3.3.3. I tried the 3.4.0 but failed the same way.
This is not exactly a solution but an alternative to utilize functionality of package locClass. Download the package file of locClass from here and source(functions.R) present here. This way you can use all functions available in package.
Note : function.R means FLXMCL.R, FLXMCLconstant.R etc.
I'm still looking for a better solution but this is a temporary alternative.