One hour increment in R, zoo - r

How can I add one hour to all the elements of the index of a zoo series?
I've tried
newseries <- myzooseries
index(newseries) <- index(myzooseries)+times("1:00:00")
but I get the message
Incompatible methods ("Ops.dates", "Ops.times") for "+"
thanks
My index is a chron object with date and time but I've tried with simpler examples and I can't get it

This is easily solved by adding the time you want in a numerical fashion :
newseries <- myzooseries
index(newseries) <- index(myzooseries) + 1/24
chron objects are represented as decimal numbers, so you can use that to calculate. A day is 1, so an hour is 1/24, a minute 1/1440 and so on. You can see this easily if you use the function times. This gives you the times of the object tested, eg :
> A <- chron(c("01/01/97","01/02/97","01/03/97"))
> B <- A + 1/24
> B
[1] (01/01/97 01:00:00) (01/02/97 01:00:00) (01/03/97 01:00:00)
> times(A)
Time in days:
[1] 9862 9863 9864
> times(B)
Time in days:
[1] 9862.042 9863.042 9864.042
> times(B-A)
[1] 01:00:00 01:00:00 01:00:00
> times(A[3]-B[1])
Time in days:
[1] 1.958333

Convert to POSIXct, add 60*60 (1h in s) and then convert back.

Related

How to convert 09:35:36 from integer to time format?

I have the following data. order.time is integer format. How to I convert it into time format, without adding date?
order.time
9:58:58
9:58:26
9:56:28
9:56:18
9:56:12
I have tried using parse_date_time, strptime, but all the functions add date and time zone in the final data. I only want to convert time from integer format to a format where I can draw plots with time in the x-axis
In the tidyverse, the hms package provides an S3 class for time of day:
> time <- hms::as_hms(c("9:58:58", "9:58:26", "9:56:28", "9:56:18", "9:56:12"))
> time
09:58:58
09:58:26
09:56:28
09:56:18
09:56:12
> class(time)
[1] "hms" "difftime"
> str(time)
'hms' num [1:5] 09:58:58 09:58:26 09:56:28 09:56:18 ...
- attr(*, "units")= chr "secs"
The function as_hms() also takes integer arguments, but only in seconds:
> (time_in_hours <- c(6, 9, 12))
[1] 6 9 12
> hms::as_hms(time_in_hours * 3600)
06:00:00
09:00:00
12:00:00
I would check out the anytime package. It works almost all of the time.
library(anytime)
order.time <- anytime(order.time)
Use as.POSIXct():
times <- as.POSIXct(c('9:58:58', 9:58:26), format = '%H:%M:%S')
Then you will have a time object, i.e: times[2] - times[1] will give you: Time diff of -32 secs.
You can plot these as is, also they can be formatted by using format(x, format).
Ex: format(times[1], format = '%H:%M:%S') will give you '09:58:58'.

How do I convert characters to a time that has fractional seconds without adding a date?

Is there a way to convert a string of characters to a time that retains the fractional seconds, but does not add a date to the data?
Background: Data that I saved overnight (starting at 22:00 and ending at 06:00) is recorded with a time, but not a date.
I would like to be able to perform something like an "if" statement on the times (i.e. if (time < midnight) date = yesterday.... else date = today)
I don't want to use something like strptime, because strptime adds today's date to the data:
> options(digits.secs=3)
> strptime("22:59:54.807", format="%H:%M:%OS")
[1] "2019-01-20 22:59:54.807 AEDT"
When I use times from the chron package, the fractional seconds are dropped:
> options(digits.secs=3)
> times("22:59:54.807")
[1] 22:59:55
Using base::strftime(), you can obtain a character of the desired time to any divide of seconds you want. Below I have saved the current time to unit 1/1000 of a second, using the number "4" after "OS":
Using current system time:
time = Sys.time()
str(time)
POSIXct[1:1], format: "2019-01-19 15:41:28.185"
newTime = strftime(Sys.time(), format="%H:%M:%OS4")
str(newTime)
chr "15:41:28.1851"
newTime
[1] "15:41:28.1851"

Create end of the month date from a date variable

I have a large data frame with date variables, which reflect first day of the month. Is there an easy way to create a new data frame date variable that represents the last day of the month?
Below is some sample data:
date.start.month=seq(as.Date("2012-01-01"),length=4,by="months")
df=data.frame(date.start.month)
df$date.start.month
"2012-01-01" "2012-02-01" "2012-03-01" "2012-04-01"
I would like to return a new variable with:
"2012-01-31" "2012-02-29" "2012-03-31" "2012-04-30"
I've tried the following but it was unsuccessful:
df$date.end.month=seq(df$date.start.month,length=1,by="+1 months")
To get the end of months you could just create a Date vector containing the 1st of all the subsequent months and subtract 1 day.
date.end.month <- seq(as.Date("2012-02-01"),length=4,by="months")-1
date.end.month
[1] "2012-01-31" "2012-02-29" "2012-03-31" "2012-04-30"
Here is another solution using the lubridate package:
date.start.month=seq(as.Date("2012-01-01"),length=4,by="months")
df=data.frame(date.start.month)
library(lubridate)
df$date.end.month <- ceiling_date(df$date.start.month, "month") - days(1)
df$date.end.month
[1] "2012-01-31" "2012-02-29" "2012-03-31" "2012-04-30"
This uses the same concept given by James above, in that it gets the first day of the next month and subtracts one day.
By the way, this will work even when the input date is not necessarily the first day of the month. So for example, today is the 27th of the month and it still returns the correct last day of the month:
ceiling_date(Sys.Date(), "month") - days(1)
[1] "2017-07-31"
Use timeLastDayInMonth from the timeDate package:
df$eom <- timeLastDayInMonth(df$somedate)
library(lubridate)
as.Date("2019-09-01") - days(1)
[1] "2019-08-31"
or
library(lubridate)
as.Date("2019-09-01") + months(1) - days(1)
[1] "2019-09-30"
A straightforward solution would be using the yearmonfunction with the argument frac=1 from the xts-package. frac is a number between 0 and 1 that indicates the fraction of the way through the period that the result represents.
as.Date(as.yearmon(seq.Date(as.Date('2017-02-01'),by='month',length.out = 6)),frac=1)
[1] "2017-02-28" "2017-03-31" "2017-04-30" "2017-05-31" "2017-06-30" "2017-07-31"
Or if you prefer “piping” using magrittr:
seq.Date(as.Date('2017-02-01'),by='month',length.out = 6) %>%
as.yearmon() %>% as.Date(,frac=1)
[1] "2017-02-28" "2017-03-31" "2017-04-30" "2017-05-31" "2017-06-30" "2017-07-31"
A function as below would do the work (assume dt is scalar) -
month_end <- function(dt) {
d <- seq(dt, dt+31, by="days")
max(d[format(d,"%m")==format(dt,"%m")])
}
If you have a vector of Dates, then do the following -
sapply(dates, month_end)
you can use timeperiodsR
date.start.month=seq(as.Date("2012-01-01"),length=4,by="months")
df=data.frame(date.start.month)
df$date.start.month
# install.packages("timeperiodsR")
pm <- previous_month(df$date.start.month[1]) # get previous month
start(pm) # first day of previous month
end(pm) # last day of previous month
seq(pm) # vector with all days of previous month
We can also use bsts::LastDayInMonth:
transform(df, date.end.month = bsts::LastDayInMonth(df$date.start.month))
# date.start.month date.end.month
# 1 2012-01-01 2012-01-31
# 2 2012-02-01 2012-02-29
# 3 2012-03-01 2012-03-31
# 4 2012-04-01 2012-04-30
tidyverse has added the clock package in addition to the lubridate package that has nice functionality for this:
library(clock)
date_build(2012, 1:12, 31, invalid = "previous")
# [1] "2012-01-31" "2012-02-29" "2012-03-31" "2012-04-30" "2012-05-31" "2012-06-30"
# [7] "2012-07-31" "2012-08-31" "2012-09-30" "2012-10-31" "2012-11-30" "2012-12-31"
The invalid argument specifies what to do with an invalid date (e.g. 2012-02-31). From the documentation:
"previous": The previous valid instant in time.
"previous-day": The previous valid day in time, keeping the time of
day.
"next": The next valid instant in time.
"next-day": The next valid day in time, keeping the time of day.
"overflow": Overflow by the number of days that the input is invalid
by. Time of day is dropped.
"overflow-day": Overflow by the number of days that the input is
invalid by. Time of day is kept.
"NA": Replace invalid dates with NA.
"error": Error on invalid dates.

Length of lubridate interval

What's the best way to get the length of time represented by an interval in lubridate, in specified units? All I can figure out is something like the following messy thing:
> ival
[1] 2011-01-01 03:00:46 -- 2011-10-21 18:33:44
> difftime(attr(ival, "start") + as.numeric(ival), attr(ival, "start"), 'days')
Time difference of 293.6479 days
(I also added this as a feature request at https://github.com/hadley/lubridate/issues/105, under the assumption that there's no better way available - but maybe someone here knows of one.)
Update - apparently the difftime function doesn't handle this either. Here's an example.
> (d1 <- as.POSIXct("2011-03-12 12:00:00", 'America/Chicago'))
[1] "2011-03-12 12:00:00 CST"
> (d2 <- d1 + days(1)) # Gives desired result
[1] "2011-03-13 12:00:00 CDT"
> (i2 <- d2 - d1)
[1] 2011-03-12 12:00:00 -- 2011-03-13 12:00:00
> difftime(attr(i2, "start") + as.numeric(i2), attr(i2, "start"), 'days')
Time difference of 23 hours
As I mention below, I think one nice way to handle this would be to implement a /.interval function that doesn't first cast its input to a period.
The as.duration function is what lubridate provides. The interval class is represented internally as the number of seconds from the start, so if you wanted the number of hours you could simply divide as.numeric(ival) by 3600, or by (3600*24) for days.
If you want worked examples of functions applied to your object, you should provide the output of dput(ival). I did my testing on the objects created on the help(duration) page which is where ?interval sent me.
date <- as.POSIXct("2009-03-08 01:59:59") # DST boundary
date2 <- as.POSIXct("2000-02-29 12:00:00")
span <- date2 - date #creates interval
span
#[1] 2000-02-29 12:00:00 -- 2009-03-08 01:59:59
str(span)
#Classes 'interval', 'numeric' atomic [1:1] 2.85e+08
# ..- attr(*, "start")= POSIXct[1:1], format: "2000-02-29 12:00:00"
as.duration(span)
#[1] 284651999s (9.02y)
as.numeric(span)/(3600*24)
#[1] 3294.583
# A check against the messy method:
difftime(attr(span, "start") + as.numeric(span), attr(span, "start"), 'days')
# Time difference of 3294.583 days
This question is really old, but I'm adding an update because this question has been viewed many times and when I needed to do something like this today, I found this page. In lubridate you can now do the following:
d1 <- ymd_hms("2011-03-12 12:00:00", tz = 'America/Chicago')
d2 <- ymd_hms("2011-03-13 12:00:00", tz = 'America/Chicago')
(d1 %--% d2)/dminutes(1)
(d1 %--% d2)/dhours(1)
(d1 %--% d2)/ddays(1)
(d1 %--% d2)/dweeks(1)
Ken, Dividing by days(1) will give you what you want. Lubridate doesn't coerce periods to durations when you divide intervals by periods. (Although the algorithm for finding the exact number of whole periods in the interval does begin with an estimate that uses the interval divided by the analagous number of durations, which might be what you are noticing).
The end result is the number of whole periods that fit in the interval. The warning message alerts the user that it is an estimate because there will be some fraction of a period that is dropped from the answer. Its not sensible to do math with a fraction of a period since we can't modify a clock time with it unless we convert it to multiples of a shorter period - but there won't be a consistent way to make the conversion. For example, the day you mention would be equal to 23 hours, but other days would be equal to 24 hours. You are thinking the right way - periods are an attempt to respect the variations caused by DST, leap years, etc. but they only do this as whole units.
I can't reproduce the error in subtraction that you mention above. It seems to work for me.
three <- force_tz(ymd_hms("2011-03-12 12:00:00"), "")
# note: here in TX, "" *is* CST
(four <- three + days(1))
> [1] "2011-03-13 12:00:00 CDT"
four - days(1)
> [1] "2011-03-12 12:00:00 CST"
Be careful when divinding time in seconds to obtain days as then you are no longer working with abstract representations of time but in bare numbers, which can lead to the following:
> date_f <- now()
> date_i <- now() - days(23)
> as.duration(date_f - date_i)/ddays(1)
[1] 22.95833
> interval(date_i,date_f)/ddays(1)
[1] 22.95833
> int_length(interval(date_i,date_f))/as.numeric(ddays(1))
[1] 22.95833
Which leads to consider that days or months are events in a calendar, not time amounts that can be measured in seconds, miliseconds, etc.
The best way to calculate differences in days is avoiding the transformation into seconds and work with days as a unit:
> e <- now()
> s <- now() - days(23)
> as.numeric(as.Date(s))
[1] 18709
> as.numeric(as.Date(e) - as.Date(s))
[1] 23
However, if you are considering a day as a pure 86400 seconds time span, as ddays() does, the previous approach can lead to the following:
> e <- ymd_hms("2021-03-13 00:00:10", tz = 'UTC')
> s <- ymd_hms("2021-03-12 23:59:50", tz = 'UTC')
> as.duration(e - s)
[1] "20s"
> as.duration(e - s)/ddays(1)
[1] 0.0002314815
> as.numeric(as.Date(e) - as.Date(s))
[1] 1
Hence, it depends on what you are looking for: time difference or calendar difference.

Change from date and hour format to numeric format

I am working in R and I need to change from a column in format
9/27/2011 3:33:00 PM
to a value format. In Excel I can use the function value() but I do not know how to do it in R.
My data looks like this:
9/27/2011 15:33 a 1 5 9
9/27/2011 15:33 v 2 6 2
9/27/2011 15:34 c 3 7 1
To convert a string into R date format, use as.POSIXct - then you can coerce it to a numeric value using as.numeric:
> x <- as.POSIXct("9/27/2011 3:33:00 PM", format="%m/%d/%Y %H:%M:%S %p")
> x
[1] "2011-09-27 03:33:00 BST"
> as.numeric(x)
[1] 1317090780
The value you get indicates the number of seconds since an arbitrary date, usually 1/1/1970. Note that this is different from Excel, where a date is stored as the number of days since an arbitrary date (1/1/1900 if my memory serves me well - I try not to use Excel any more.)
For more information, see ?DateTimeClasses
This was useful for me:
> test=as.POSIXlt("09/13/2006", format="%m/%d/%Y")
> test
[1] "2006-09-13"
> 1900+test$year
[1] 2006
> test$yday
[1] 255
> test$yday/365
[1] 0.6986301
> 1900+test$year+test$yday/366
[1] 2006.697
You can use similar approaches if you need day numbers like in Excel.

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