When i install gdalcubes on ubuntu 20.04 with R, i have this error :
installing to /home/obstetar/R/x86_64-pc-linux-gnu-library/4.1/00LOCK-gdalcubes/00new/gdalcubes/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
munmap_chunk(): invalid pointer
Aborted (core dumped)
ERROR: loading failed
removing ‘/home/obstetar/R/x86_64-pc-linux-gnu-library/4.1/gdalcubes’
Warning in install.packages :
installation of package ‘gdalcubes’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp6dZFPa/downloaded_packages’
Related
I am trying to install ENMtools in R version 3.6.3 (2020-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Linux Mint 20.1
But get the following error:
installing to /home/alonso/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-rgeos/00new/rgeos/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
DONE (rgeos)
installing source package ‘ENMTools’ ...
** package ‘ENMTools’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
double free or corruption (!prev)
Aborted (core dumped)
ERROR: lazy loading failed for package ‘ENMTools’
removing ‘/home/XXX/R/x86_64-pc-linux-gnu-library/3.6/ENMTools’
Warning in install.packages :
installation of package ‘ENMTools’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpWvRhkI/downloaded_packages’
Any help would be much appreciated
I'm using a Mac with OS Sierra 10.12.5. I'm having trouble with installing the R package "data.table," including if I try to install via install.packages("Hmisc"), or install.packages("data.table"). Both result in:
installing to /Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-data.table/00new/data.table/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘data.table’ in library.dynam(lib, package, package.lib):
shared object ‘datatable.so’ not found
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/data.table’
The downloaded source packages are in
‘/private/var/folders/bl/lgd7_j2j087f24tcly84xg580000gn/T/RtmpbM5EaD/downloaded_packages’
Warning message:
In install.packages("data.table") :
installation of package ‘data.table’ had non-zero exit status
I then tried installing directly from the .zip at: https://github.com/Rdatatable/data.table, but got the following "not available for R 3.6.3" message:
> install.packages("~/Downloads/data.table-master.zip")
Warning message:
package ‘~/Downloads/data.table-master.zip’ is not available (for R version 3.6.3)
I tried the approaches in this thread, but none worked :\ : Problems installing data.table for R
Any advice for what I can try next, or where I can access a version of data.table specifically for R 3.6.3?
Having issues downloading nflscrapR. Not sure if anyone else has this issue. Output from trying to install below:
Installing package into ‘C:/Users/cciar/OneDrive/Documents/R/win-library/3.6’
(as ‘lib’ is unspecified)
* installing *source* package 'nflscrapR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error: (converted from warning) package 'magrittr' was built under R version 3.6.3
Execution halted
ERROR: lazy loading failed for package 'nflscrapR'
* removing 'C:/Users/cciar/OneDrive/Documents/R/win-library/3.6/nflscrapR'
Error: Failed to install 'nflscrapR' from GitHub:
(converted from warning) installation of package ‘C:/Users/cciar/AppData/Local/Temp/Rtmp6diEQG/file5f042b671761/nflscrapR_1.8.3.tar.gz’ had non-zero exit status
I have a serious problem about R package installation in windows where I haven't got the administrator priveleges. For example, to install ggplot2 I did :
install.packages("C:/Users/Rasengan/Downloads/ggplot2_1.0.0.tar.gz", repos = NULL, type="source")
I get this error message :
ERROR: dependencies 'plyr', 'gtable', 'reshape2', 'scales', 'proto' are not available for package 'ggplot2'
* removing 'C:/Program Files/R/R-3.1.1/library/ggplot2'
Warning messages:
1: running command '"C:/PROGRA~1/R/R-31~1.1/bin/i386/R" CMD INSTALL -l "C:\Program Files\R\R-3.1.1\library" "C:/Users/Rasengan/Downloads/ggplot2_1.0.0.tar.gz"' had status 1
2: In install.packages("C:/Users/Rasengan/Downloads/ggplot2_1.0.0.tar.gz", :
installation of package ‘C:/Users/Rasengan/Downloads/ggplot2_1.0.0.tar.gz’ had non-zero exit status
So the problem come from the pakage which depends ggplot2, what I tried is to install the different packages ('plyr', 'gtable', 'reshape2', 'scales', 'proto') one by one but the process is endless because 'plyr' depended of many or packages ...
Please could you help me, because I need shiny, ggplot2 and rCharts for my work.
Thank you in advance!
PS: the proto package doesn't depend of an other package, so I installed it easly :
> install.packages("C:/Users/Rasengan/Downloads/proto_0.3-10.tar.gz", repos = NULL, type="source")
* installing *source* package 'proto' ...
** package 'proto' successfully unpacked and MD5 sums checked
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'proto.Rnw'
'protoref.Rnw'
** testing if installed package can be loaded
* DONE (proto)
I tried to install the package statDA without success.These are the last rows of the message I received in RStudio:
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (geoR)
ERROR: dependency ‘MBA’ is not available for package ‘StatDA’
* removing ‘/home/matteo/R/i686-pc-linux-gnu-library/3.0/StatDA’
Warning in install.packages :
installation of package ‘StatDA’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpwirNxx/downloaded_packages’
I also tried to install the MBA package but actually the same error appeared.
I'm on a Ubuntu (12.04) machine running R 3.0.