After installing the latest Julia (v.1.0) package using conda, on Ubuntu v.16.04, via
conda install -c conda-forge julia
I can't seem to install IJulia.
Thus,
(v1.0) pkg> add IJulia
Updating registry at `~/.julia/registries/General`
Updating git-repo `https://github.com/JuliaRegistries/General.git`
Resolving package versions...
Installed VersionParsing ── v1.1.3
Installed Conda ─────────── v1.0.2
Installed JSON ──────────── v0.19.0
Installed Compat ────────── v1.2.0
Installed ZMQ ───────────── v1.0.0
Installed IJulia ────────── v1.12.0
Installed BinaryProvider ── v0.5.1
Installed MbedTLS ───────── v0.6.3
Installed SoftGlobalScope ─ v1.0.7
Updating `~/.julia/environments/v1.0/Project.toml`
[7073ff75] + IJulia v1.12.0
Updating `~/.julia/environments/v1.0/Manifest.toml`
[b99e7846] + BinaryProvider v0.5.1
[34da2185] + Compat v1.2.0
[8f4d0f93] + Conda v1.0.2
[7073ff75] + IJulia v1.12.0
[682c06a0] + JSON v0.19.0
[739be429] + MbedTLS v0.6.3
[b85f4697] + SoftGlobalScope v1.0.7
[81def892] + VersionParsing v1.1.3
[c2297ded] + ZMQ v1.0.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[7b1f6079] + FileWatching
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
and when building, I get the following error:
Building Conda ──→ `~/.julia/packages/Conda/hsaaN/deps/build.log`
Building ZMQ ────→ `~/.julia/packages/ZMQ/ABGOx/deps/build.log`
┌ Error: Error building `ZMQ`:
│ ERROR: LoadError: LoadError: Unable to open libLLVM!
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] (::getfield(BinaryProvider, Symbol("#open_libllvm#114")))() at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:649
│ [3] detect_cxx11_string_abi() at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:652
│ [4] detect_compiler_abi() at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:665
│ [5] top-level scope at none:0
│ [6] include at ./boot.jl:317 [inlined]
│ [7] include_relative(::Module, ::String) at ./loading.jl:1038
│ [8] include at ./sysimg.jl:29 [inlined]
│ [9] include(::String) at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/BinaryProvider.jl:1
│ [10] top-level scope at none:0
│ [11] include at ./boot.jl:317 [inlined]
│ [12] include_relative(::Module, ::String) at ./loading.jl:1038
│ [13] include(::Module, ::String) at ./sysimg.jl:29
│ [14] top-level scope at none:2
│ [15] eval at ./boot.jl:319 [inlined]
│ [16] eval(::Expr) at ./client.jl:389
│ [17] top-level scope at ./none:3
│ in expression starting at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:682
│ in expression starting at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/BinaryProvider.jl:12
│ ERROR: LoadError: Failed to precompile BinaryProvider [b99e7846-7c00-51b0-8f62-c81ae34c0232] to /home/daniel/.julia/compiled/v1.0/BinaryProvider/ek6VZ.ji.
which is followed by
Building MbedTLS → `~/.julia/packages/MbedTLS/mkHpa/deps/build.log`
┌ Error: Error building `MbedTLS`:
│ ERROR: LoadError: LoadError: Unable to open libLLVM!
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] (::getfield(BinaryProvider, Symbol("#open_libllvm#114")))() at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:649
│ [3] detect_cxx11_string_abi() at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:652
│ [4] detect_compiler_abi() at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:665
│ [5] top-level scope at none:0
│ [6] include at ./boot.jl:317 [inlined]
│ [7] include_relative(::Module, ::String) at ./loading.jl:1038
│ [8] include at ./sysimg.jl:29 [inlined]
│ [9] include(::String) at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/BinaryProvider.jl:1
│ [10] top-level scope at none:0
│ [11] include at ./boot.jl:317 [inlined]
│ [12] include_relative(::Module, ::String) at ./loading.jl:1038
│ [13] include(::Module, ::String) at ./sysimg.jl:29
│ [14] top-level scope at none:2
│ [15] eval at ./boot.jl:319 [inlined]
│ [16] eval(::Expr) at ./client.jl:389
│ [17] top-level scope at ./none:3
│ in expression starting at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/PlatformNames.jl:682
│ in expression starting at /home/daniel/.julia/packages/BinaryProvider/cVlaj/src/BinaryProvider.jl:12
│ ERROR: LoadError: Failed to precompile BinaryProvider [b99e7846-7c00-51b0-8f62-c81ae34c0232] to /home/daniel/.julia/compiled/v1.0/BinaryProvider/ek6VZ.ji.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] macro expansion at ./logging.jl:313 [inlined]
│ [3] compilecache(::Base.PkgId, ::String) at ./loading.jl:1184
│ [4] _require(::Base.PkgId) at ./logging.jl:311
│ [5] require(::Base.PkgId) at ./loading.jl:852
│ [6] macro expansion at ./logging.jl:311 [inlined]
│ [7] require(::Module, ::Symbol) at ./loading.jl:834
│ [8] include at ./boot.jl:317 [inlined]
│ [9] include_relative(::Module, ::String) at ./loading.jl:1038
│ [10] include(::Module, ::String) at ./sysimg.jl:29
│ [11] include(::String) at ./client.jl:388
│ [12] top-level scope at none:0
│ in expression starting at /home/daniel/.julia/packages/MbedTLS/mkHpa/deps/build.jl:1
└ # Pkg.Operations /home/conda/feedstock_root/build_artifacts/julia_1534540929950/work/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:1068
Building IJulia ─→ `~/.julia/packages/IJulia/4VL8h/deps/build.log`
Trying to build ZMQ or BinaryProvider separately gives the same error: that it's unable to open libLLVM.
I haven't encountered the problem when using older versions of Julia, neither an answer to the problem in any of the previous threads. Any ideas?
In regards to libLLVM, check out this link libLLVM
What I would recommend: try removing those packages, adding them back, doing an update, and then resolve.
I am currently converting my code from Julia v0.6 to v0.7 and this is something I have had to do way too much over the last few days.
It may also be worth it to take a look at the specific location in those files where the error is occurring. I have a similar issue with a package and I went into the file and saw that it was testing my OS version, and I was on a non-supported version of MacOs(while unlikely to be your issue, it could be something similar).
Please let me know what happens after the steps I recommended. Good Luck!
Related
Just installed Julia v1.5.1 under Windows 2012 R2. Get similar error to what was reported here:
I got a message "using Plots" in Julia and I do no how to resolve it
If I follow the steps seen here for MacOS Catalina :
https://github.com/JuliaLang/julia/issues/36893
to rollback to x264_jll#2019.5.25
then the precompile of Plots will succeed,as seen below. Thinking I maybe needed FFMPEG DLL files, I downloaded latest Windows binary (Shared linking!) from https://ffmpeg.zeranoe.com/builds/ and added that \bin\ path to my System PATH and restarted. Folder contains avcodec-58.dll, the DLL reported as missing. Still get the error as seen below.
I worry I'll apply an update to packages that will break this at some point. Is there a fix to make this work with latest version of x264_jll?
_
_ _ _(_)_ | Documentation: https://docs.julialang.org
(_) | (_) (_) |
_ _ _| |_ __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ _` | |
| | |_| | | | (_| | | Version 1.5.1 (2020-08-25)
_/ |\__'_|_|_|\__'_| | Official https://julialang.org/ release
|__/ |
(#v1.5) pkg> status
Status `C:\Users\jort\.julia\environments\v1.5\Project.toml`
[91a5bcdd] Plots v1.6.3
[1270edf5] x264_jll v2020.7.14+1
julia> using Plots
[ Info: Precompiling Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
ERROR: LoadError: InitError: could not load library "C:\Users\jort\.julia\artifa
cts\7350a6401f1c0d38cc3518193083bc4f83adfe99\bin\avcodec-58.dll"
The specified module could not be found.
Stacktrace:
[1] dlopen(::String, ::UInt32; throw_error::Bool) at D:\buildbot\worker\package
_win64\build\usr\share\julia\stdlib\v1.5\Libdl\src\Libdl.jl:109
[2] dlopen at D:\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1.
5\Libdl\src\Libdl.jl:109 [inlined] (repeats 2 times)
[3] __init__() at C:\Users\jort\.julia\packages\FFMPEG_jll\w0b7h\src\wrappers\x
86_64-w64-mingw32.jl:234
[4] _include_from_serialized(::String, ::Array{Any,1}) at .\loading.jl:697
[5] _require_from_serialized(::String) at .\loading.jl:749
[6] _require(::Base.PkgId) at .\loading.jl:1040
[7] require(::Base.PkgId) at .\loading.jl:928
[8] require(::Module, ::Symbol) at .\loading.jl:923
[9] include(::Function, ::Module, ::String) at .\Base.jl:380
[10] include(::Module, ::String) at .\Base.jl:368
[11] top-level scope at none:2
[12] eval at .\boot.jl:331 [inlined]
[13] eval(::Expr) at .\client.jl:467
[14] top-level scope at .\none:3
during initialization of module FFMPEG_jll
in expression starting at C:\Users\jort\.julia\packages\FFMPEG\aazvf\src\FFMPEG.
jl:3
ERROR: LoadError: Failed to precompile FFMPEG [c87230d0-a227-11e9-1b43-d7ebe4e75
70a] to C:\Users\jort\.julia\compiled\v1.5\FFMPEG\TGvga_Ve7jx.ji.
Stacktrace:
[1] error(::String) at .\error.jl:33
[2] compilecache(::Base.PkgId, ::String) at .\loading.jl:1305
[3] _require(::Base.PkgId) at .\loading.jl:1030
[4] require(::Base.PkgId) at .\loading.jl:928
[5] require(::Module, ::Symbol) at .\loading.jl:923
[6] include(::Function, ::Module, ::String) at .\Base.jl:380
[7] include(::Module, ::String) at .\Base.jl:368
[8] top-level scope at none:2
[9] eval at .\boot.jl:331 [inlined]
[10] eval(::Expr) at .\client.jl:467
[11] top-level scope at .\none:3
in expression starting at C:\Users\jort\.julia\packages\Plots\M1wcx\src\Plots.jl
:15
ERROR: Failed to precompile Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80] to C:\U
sers\jort\.julia\compiled\v1.5\Plots\ld3vC_Ve7jx.ji.
Stacktrace:
[1] error(::String) at .\error.jl:33
[2] compilecache(::Base.PkgId, ::String) at .\loading.jl:1305
[3] _require(::Base.PkgId) at .\loading.jl:1030
[4] require(::Base.PkgId) at .\loading.jl:928
[5] require(::Module, ::Symbol) at .\loading.jl:923
(#v1.5) pkg> add x264_jll#2019.5.25
Updating registry at `C:\Users\jort\.julia\registries\General`
Resolving package versions...
Updating `C:\Users\jort\.julia\environments\v1.5\Project.toml`
[1270edf5] ↓ x264_jll v2020.7.14+1 ? v2019.5.25+2
Updating `C:\Users\jort\.julia\environments\v1.5\Manifest.toml`
[c87230d0] ↓ FFMPEG v0.4.0 ? v0.3.0
[b22a6f82] ↓ FFMPEG_jll v4.3.1+2 ? v4.1.0+3
[1270edf5] ↓ x264_jll v2020.7.14+1 ? v2019.5.25+2
(#v1.5) pkg> status
Status `C:\Users\jort\.julia\environments\v1.5\Project.toml`
[91a5bcdd] Plots v1.6.3
[1270edf5] x264_jll v2019.5.25+2
julia> using Plots
[ Info: Precompiling Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
julia>
I wanted to start using dedicated environments for all my julia projects, but activating the new environment and using packages (eg. Plots.jl) results in Precompiling that fails with the following error:
Activating environment at `~/Documents/baro/Project.toml`
julia> using Plots
[ Info: Precompiling Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
ERROR: LoadError: InitError: could not load library "/home/marius/.julia/artifacts/08ab4b2de494e1d61e581ab1fbd610b0b4d1876f/lib/libavdevice.so"
libx264.so.157: cannot open shared object file: No such file or directory
Stacktrace:
[1] dlopen(::String, ::UInt32; throw_error::Bool) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.4/Libdl/src/Libdl.jl:109
[2] dlopen at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.4/Libdl/src/Libdl.jl:109 [inlined] (repeats 2 times)
[3] __init__() at /home/marius/.julia/packages/FFMPEG_jll/tCUYA/src/wrappers/x86_64-linux-gnu.jl:231
[4] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:697
[5] _require_search_from_serialized(::Base.PkgId, ::String) at ./loading.jl:781
[6] _require(::Base.PkgId) at ./loading.jl:1006
[7] require(::Base.PkgId) at ./loading.jl:927
[8] require(::Module, ::Symbol) at ./loading.jl:922
[9] include(::Module, ::String) at ./Base.jl:377
[10] top-level scope at none:2
[11] eval at ./boot.jl:331 [inlined]
[12] eval(::Expr) at ./client.jl:449
[13] top-level scope at ./none:3
during initialization of module FFMPEG_jll
in expression starting at /home/marius/.julia/packages/FFMPEG/vocw2/src/FFMPEG.jl:3
ERROR: LoadError: Failed to precompile FFMPEG [c87230d0-a227-11e9-1b43-d7ebe4e7570a] to /home/marius/.julia/compiled/v1.4/FFMPEG/TGvga_eB360.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/marius/.julia/packages/Plots/LWw1t/src/Plots.jl:15
ERROR: Failed to precompile Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80] to /home/marius/.julia/compiled/v1.4/Plots/ld3vC_eB360.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
This also happens for some other packages like ControlSystems.
The julia version is 1.4.2 but I was able to reproduce this error with 1.5.0 and on a different computer with 1.3.1 on it. Both systems are runnning Ubuntu 20.04 LTS.
What I tried so far was:
Rebuilding the package Pkg.build()
Check that the file supposed to load exists (it existed)
Update libx264
Deleting all packages in .julia folder and and reinstalling everything using Pkg.instantiate()
Any help to get the packages running will be greatly appreciated as I really like the idea of having dedicated environments for every project. Also on 1.3.1 even after switching to the default environment the error is still occuring.
The issue seems to lay in the FFMPEG package.
The following solved the issue for me:
Remove FFMPEG. Then delete the folder which is given in the error message. In your case: "/home/marius/.julia/artifacts/08ab4b2de494e1d61e581ab1fbd610b0b4d1876f/lib/libavdevice.so"
Then add FFPEG again which results in a change in the Manifest.toml which does not happen if you just remove FFMPEG:
Updating `~/.julia/environments/v1.3/Manifest.toml`
[1270edf5] ↓ x264_jll v2020.7.14+0 ⇒ v2019.5.25+2
Try: using FFMPEG, Plots.
I was able to precompile Plots then.
I am trying to install and build Clp on my system in julia but am receiving an error:
Error: Error building `Clp`:
│ ERROR: LoadError: LibraryProduct(nothing, ["libClp"], :libClp, "Prefix(/global/home/users/gorman_will/.julia/packages/Clp/cX6R7/deps/usr)") is not satisfied, cannot generate deps.jl!
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] #write_deps_file#165(::Bool, ::Bool, ::Function, ::String, ::Array{LibraryProduct,1}) at /global/home/users/gorman_will/.julia/packages/BinaryProvider/GeAtj/src/Products.jl:419
│ [3] (::getfield(BinaryProvider, Symbol("#kw##write_deps_file")))(::NamedTuple{(:verbose,),Tuple{Bool}}, ::typeof(write_deps_file), ::String, ::Array{LibraryProduct,1}) at ./none:0
│ [4] top-level scope at none:0
│ [5] include at ./boot.jl:317 [inlined]
│ [6] include_relative(::Module, ::String) at ./loading.jl:1044
│ [7] include(::Module, ::String) at ./sysimg.jl:29
│ [8] include(::String) at ./client.jl:392
│ [9] top-level scope at none:0
│ in expression starting at /global/home/users/gorman_will/.julia/packages/Clp/cX6R7/deps/build.jl:144
└ # Pkg.Operations /global/software/sl-7.x86_64/sources/julia-1.0.3/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:1097
I am thinking this might have something to do with potentially needing a custom installation, but am not sure..
Julia session info:
julia> versioninfo()
Julia Version 1.0.3
Platform Info:
OS: Linux (x86_64-redhat-linux)
CPU: Intel(R) Xeon(R) CPU E5-2670 0 # 2.60GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-6.0.0 (ORCJIT, sandybridge)
Environment:
JULIA_DIR = /global/software/sl-7.x86_64/modules/langs/julia/1.0.3
Package version in my project:
julia> Pkg.status()
Status `~/.julia/environments/v1.0/Project.toml`
[e2554f3b] Clp v0.8.0
[e2685f51] ECOS v0.11.0
[4076af6c] JuMP v0.21.2
[eadc2687] Pandas v1.4.0
Issue is posted on github here: github.com/JuliaOpt/Clp.jl/issues/90
For the above system, you need to make sure that a GNU compiler collection (gcc) is loaded onto the system before installing and building the Clp package in Julia.
I added the Mathematica package (https://github.com/JuliaInterop/Mathematica.jl) to julia 1.3.1.
Now if I use command...
using Mathematica
I get this error:
[ Info: Precompiling Mathematica [32681abc-2ee8-5d23-a06a-fe3af83833d6]
┌ Warning: Package Mathematica does not have MathLink in its dependencies:
│ - If you have Mathematica checked out for development and have
│ added MathLink as a dependency but haven't updated your primary
│ environment's manifest file, try `Pkg.resolve()`.
│ - Otherwise you may need to report an issue with Mathematica
└ Loading MathLink into Mathematica from project dependency, future warnings for Mathematica are suppressed.
ERROR: LoadError: LoadError: UndefVarError: #mmimport not defined
Stacktrace:
[1] top-level scope
[2] eval at ./boot.jl:330 [inlined]
[3] top-level scope at /Users/murray/.julia/packages/Mathematica/W4UIg/src/Mathematica.jl:36
[4] include at ./boot.jl:328 [inlined]
[5] include_relative(::Module, ::String) at ./loading.jl:1105
[6] include(::Module, ::String) at ./Base.jl:31
[7] top-level scope at none:2
[8] eval at ./boot.jl:330 [inlined]
[9] eval(::Expr) at ./client.jl:425
[10] top-level scope at ./none:3
in expression starting at /Users/murray/.julia/packages/Mathematica/W4UIg/src/Mathematica.jl:36
in expression starting at /Users/murray/.julia/packages/Mathematica/W4UIg/src/Mathematica.jl:34
ERROR: Failed to precompile Mathematica [32681abc-2ee8-5d23-a06a-fe3af83833d6] to /Users/murray/.julia/compiled/v1.3/Mathematica/cqgUM_XJ2Lx.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1283
[3] _require(::Base.PkgId) at ./loading.jl:1024
[4] require(::Base.PkgId) at ./loading.jl:922
[5] require(::Module, ::Symbol) at ./loading.jl:917
How do I correct this?
Per Chris’s comment, the suggestion is to use MathLink.jl. I talked to the package maintainer for Mathematica and added to deprecation warning to the readme as to avoid future issues.
I have Julia, Juno, and Atom installed in my computer. It works well. I was trying to use Pkg.clone() based on this link:https://github.com/uoa-ems-research/JEMSS.jl
I got the error message like the following:
julia> Pkg.clone("https://github.com/samridler/JEMSS.jl.git")
Updating git-repo `https://github.com/samridler/JEMSS.jl.git`
[ Info: Assigning UUID 24979329-2a3d-50cf-82e3-05af2f1830ac to JEMSS
[ Info: Path `/Users/jack/.julia/dev/JEMSS` exists and looks like the correct package, using existing path instead of cloning
Resolving package versions...
ERROR: Unsatisfiable requirements detected for package Stats [072d6d2a]:
Stats [072d6d2a] log:
├─possible versions are: [0.0.1, 0.1.0] or uninstalled
├─restricted to versions 0.0.0-* by JEMSS [24979329], leaving only versions [0.0.1, 0.1.0]
│ └─JEMSS [24979329] log:
│ ├─possible versions are: 0.0.0 or uninstalled
│ └─JEMSS [24979329] is fixed to version 0.0.0
└─restricted by julia compatibility requirements to versions: uninstalled — no versions left
Stacktrace:
[1] #propagate_constraints!#61(::Bool, ::Function, ::Pkg.GraphType.Graph, ::Set{Int64}) at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/GraphType.jl:1005
[2] propagate_constraints! at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/GraphType.jl:946 [inlined]
[3] #simplify_graph!#121(::Bool, ::Function, ::Pkg.GraphType.Graph, ::Set{Int64}) at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/GraphType.jl:1460
[4] simplify_graph! at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/GraphType.jl:1460 [inlined]
[5] macro expansion at ./logging.jl:317 [inlined]
[6] resolve_versions!(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}, ::Nothing) at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:353
[7] resolve_versions! at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:316 [inlined]
[8] #add_or_develop#62(::Array{Base.UUID,1}, ::Symbol, ::Function, ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:1201
[9] #add_or_develop at ./none:0 [inlined]
[10] #add_or_develop#13(::Symbol, ::Bool, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/API.jl:64
[11] #add_or_develop at ./none:0 [inlined]
[12] #develop#19 at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/API.jl:70 [inlined]
[13] develop at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/API.jl:70 [inlined]
[14] macro expansion at ./logging.jl:308 [inlined]
[15] clone(::String, ::String) at /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.0/Pkg/src/API.jl:468 (repeats 2 times)
[16] top-level scope at none:0
So, it looks like I need to clear/delete the file located at. ./Users/jack/.julia/dev/JEMSS and try this again, right? Maybe because I cloned this file more than once I guess? Is there a command I can use?
This is because the Stats package is not compatible with your julia versions, which looks like it is 0.7 or 1.0 based on the messages. Just rm the package. For now you'll have to load the JuliaStats packages manually.