R help error : Error in startDynamicHelp(TRUE) - r

I am new to R and getting below error message when I run ?mpg command in R console.
starting httpd help server ...Error in startDynamicHelp(TRUE) : internet routines cannot be loaded
I am running R version 3.4.1 on mac os Sierra.
Any suggestion would be appreciated.

It might be a conflict between 64-bit and 32-bit versions of R.
Have you tried this answer
Also, try running R.Version() to check the version and sys details.

Related

R Session Aborted while loading RWeka

I cannot load RWeka library in Rstudio session while I have got it installed without problems.
The library(RWeka) command is simply interrupted by a "R Session Aborted" error and R is restarted.
I'm currently working with
Windows 10
RStudio 2022.02.2 Build 485
R 4.2.0
I have tried to load RWeka running R in a terminal and I haven't had any problem.
Any suggestion will be wellcome.
Kind Regards.
I had the same issue and I've confirmed it on Twitter. I have now found a solution: you need to install a patched version of R, available here: https://cran.r-project.org/bin/windows/base/rpatched.html. Take care to select the patched version in RStudio and then the crash should disappear.

Exporting excel files from R in windows [duplicate]

I am trying to load the rJava using the command:
library(rJava)
But I get the following error:
Error : .onLoad failed in loadNamespace() for 'rJava', details:
call: fun(libname, pkgname)
error: JAVA_HOME cannot be determined from the Registry
Error: package or namespace load failed for ‘rJava’
I tried reinstalling both the Java and the R program with the latest versions
but still get these errors..
May I know how I can resolve this? Thank you very much!
This error is often resolved by installing a Java version (i.e. 64-bit Java or 32-bit Java) that fits to the type of R version that you are using (i.e. 64-bit R or 32-bit R). This problem can easily effect Windows 7 users, since they might have installed a version of Java that is different than the version of R they are using.
http://www.r-statistics.com/2012/08/how-to-load-the-rjava-package-after-the-error-java_home-cannot-be-determined-from-the-registry/
Install 64 bit Java from https://java.com/en/download/manual.jsp.
Then in windows cmd run
setx PATH "C:\Program Files\Java\jre1.8.0_211\bin\server;%PATH%"
(make sure your path is correct).
Then in RStudio run
Sys.setenv(JAVA_HOME="")
Now, you should be able to run rJava!!
I got the same error resolved by installing same version of R and Java i.e. 64 bits and manually updating the path i.e. ,
Sys.setenv(JAVA_HOME='C:/Program Files/Java/jre1.8.0_121') # for 64-bit version
R for Windows installer installs by default both 32-bit and 64-bit files. Reinstalling R and unticking 32-bit part solved the problem for me.
Under Windows 10, first check your (running) R-Version:
R.version
If you see something like x86_64, a 64-bit version of Java is needed.
Simply downloading and installing the matching Java version (https://java.com/en/download/manual.jsp) solved the problem for me. No reinstall of R needed (as suggested by other users here). There also was no need to set the path explicitly.
As mentioned in the r-statistics link cited above, you have to manually download the 64-bit version of Java. If not, then the 32-bit version will be installed.
So, if you have a 64-bit operating system, then ensure that both R and Java are using the 64-bit installs. Otherwise, this problem will persist.
This has been killing me and I have tried multiple methods above, it doesn't work. After, I mix all solution to try and below process works for me.
Install Java for 64 bit
Run below code in windows command
setx PATH "C:\Program Files\Java\jre1.8.0_171\bin\server;%PATH%"
(please change the address acorrding to your dvm.dll real address)
Run below in R studio
Sys.setenv(JAVA_HOME="")
Then I finally can run
library(rJava)
library(xlsx)
I faced the same issue and was feeling very down as I couldnt get my analysis done.
This worked for me :
check your operating system. 64 bit or 32 bit.
https://helpx.adobe.com/x-productkb/global/determine-whether-computer-running-32.html
uninstall previous versions of Java.
delete rJAVA library from Doc>R>win-library. If you have more than 1 versions of R, make sure you delete rJAVA package from all of them.
install Java based on system requirement (64 bit or 32 bit).
and finally restart R before and after installing rJava package.
If R is 64-bit version make sure to install Java 64-bit version!
If R is x86-bit version make sure to install Java x86-bit version!
You can add INSTALL_opts=c("--no-multiarch") to your install_github() call:
devtools::install_github("mne-tools/mne-r", INSTALL_opts=c("--no-multiarch"))
For more info: https://github.com/mne-tools/mne-r/issues/5#issuecomment-489588267
Create a new directory in C: drive as "library"
set your libPath this directory. you need to type
.libPath("C:/library")
reinstall packages which requires java (xlsx, rJava, RJDemetra)
it will give error message again but it will work.

RStudio Install Packages and Package Updates both download then fail with cannot open file

Running happily with R 3.4 and RStudio 1.0.143 under Win10 this problem occured bringing project development to a halt. Downloads each occur and are unzipped and then the a presumably first file in the first item gets:
Error in install.packages : cannot open file 'C:/Users/Admin/Documents/R/
win-library/3.4/file30504386b80/rJava/javadoc/resources/background.gif':
Permission denied
and the prompt returns.
Updating to R version 3.4.1 (2017-06-30), RStudio Version 1.0.153 was to no avail. Using the OS to remolve all R versions and trying again with 3.4.1 did not work. Removing R again and deleting the R directory to refresh the library did not work. My virius software like to tell how helpful it has been and has not, so that issue seems unlikely.
Giving the user full control of the R library did not help.
could package-updates be a tag like install-updates?
It looks there is a problem between Java and rJava.
You should try reinstalling Java using chocolatey package manager (https://chocolatey.org/) and then reinstall rJava package.
I had a similar issue two weeks ago on a windows laptop.
I had this problem for a long time. only in RStudio.
Install the package on R and Library it. Go to RStudio and require the package.
It works!

forecast.HoltWinters : function not found error message remote machine but same code run in another machine

I am using R version 3.4.1 (2017-06-30) in remote machine and R version 3.3.2 (2016-10-31) n my desktop
In the remote machine, it's throwing me an error by saying forecast.HoltWinters not found
I have kept exact replica of all inputs required in both machine
I have cross checked all the required packages are installed
I am not sure where I am doing wrong can some one help to resolve this issue?
Please, try to use forecast:::forecast.HoltWinters (triple colons).

doRedis with strange socket connection error in Ubuntu Linux, R, and RStudio

I am trying to get doRedis R package working in my latest Ubuntu 10.0.4 environment with R 2.12.1. I tried download the latest 2.15.1 but it installs (with apt-get install...) this other version. Anyhow, when I run the following lines from doRedis.R (http://bigcomputing.com/doredis.R):
library('doRedis') #no issues here
registerDoRedis(queue='jobs')
I get the error of:
registerDoRedis(queue='jobs')
Error in socketConnection(host, port, open = "a+b", blocking = TRUE, timeout = timeout) :
unused argument(s) (timeout = timeout)
I also have the Redis-server running waiting to accept connections with no problems. I could connect with Redis-cli client no problems. This is all local to the same system.
This runs fine on my Windows 7 with no problems.
Thanks
The version Ubuntu has in its own repositories is quite old. You can add CRAN to your sources.list and get the latest version through that repository. Read the instructions at this page for more information.
In regard to your real question, it seems that a call to socketConnection includes an input argument it does not support. Please check which version of the package you are running, is it the same as you run under Windows 7? In addition, please upgrade your version of R to 2.15 using the link above.

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