Created a R Markdown analysis in RStudio, and used Knitr to create an HTML file and preserve the .md file. The local HTML file is rendered as expected; plots and formatting. But when I push to my Github repo, the plots are not displaying: https://github.com/GoodTimeWagon/RepData_PeerAssessment1/blob/master/Reproducible_Research_Peer_Assessment_1.md
In place of a plot it says -
![](Reproducible_Research_Peer_Assessment_1_files/figure-html/histogram daily steps-1.png)
I've pushed the image files as well as the markdown, so I'm really at a loss. Thank you in advance for answers.
Related
Very new to R. I need to make a PDF document using R markdown for a lab report.
How do I add images to a markdown?
You can include this in your .Rmd file:
![Add some text here](path_to_your_image)
I would also recommend you to take a look at this book (written by the authors of R Markdown) if you want to learn more.
I have a word document with notes from a class. In this document there are images (screenshots from the lecture). I am hoping to make a book, hopefully in bookdown, to help me organize my notes and my R code. I used pandoc to convert the word document and extracted the images, but only some of the images are showing up when i knit the markdown output in RStudio. Any idea why some would show and some wouldnt? COuld it be because i'm changing the .md that pandoc gives to .rmd and they just dont play well together?
I'm working on a document with Rmarkdown on RStudio. In that rmd I use shiny runtime and my question is if I could generate some file with that document to open it outside RStudio, just like rmd without shiny runtime which generates an .html.
I was searching but I found nothing, does anyone know some tool to do that?
Many thanks!
Xevi
I have been using .Rmarkdown files to create blog posts in R blogdown. The output of chunk of codes in .Rmarkdown documents are printed in the console and not in the document.
If instead I create a .rmd file, then previews are in window. RStudio Global options are set to show preview in window for RMarkdown documents.
Is this an expected behavior of .rmarkdown files?
Thanks
The differences between .Rmarkdown and .Rmd is explained here. The most relevant quote being:
In this book, we usually mean .Rmd files when we say “R Markdown documents,” which are compiled to .html by default. However, there is another type of R Markdown document with the filename extension .Rmarkdown. Such R Markdown documents are compiled to Markdown documents with the extension .markdown, which will be processed by Hugo instead of Pandoc.
More specific differences are explained in the book linked above.
I am writing an R presentation in an .Rpres file. I published my presentation on Rpubs here: http://rpubs.com/cr517/presentationGurdon
I have images stored in PDF files. I am trying to include them in my presentation, unsuccesfully. I am using this command to include the images:
![Chromosome sizes](input/images/bar/nbOfGenesPerChrom.pdf)
the same as for .jpg. This command does not result in the display of the image. I have tried to follow these answers but could not make it work:
R markdown: can I insert a pdf to the r markdown file as an image?
Add pdf file in Rmarkdown file
If somebody could help me, that would be much appreciated. That would spare me the re-run of my code exporting images in .jpg format.
Thank you so much.