Use CSV-Import in RStudio fails installing dependencies - r

I just updated to RStudio 1.0.136 and tried to import a csv. Therefore it wants me to install a package called readr. If I try this, it fails installing its dependency on tibble with error message:
RcppExports.cpp:4:10: fatal error: 'Rcpp.h' file not found
#include <Rcpp.h>
^
Since this seems to be some problem with the package itself and the integration of C++ code, is there anything I can do beside filing a bug report?

I recognised that the error also occured for some other packages such as GGPLOT2. I updated my R version to 3.3 and all packages without success. Finally I ran brew uninstall --force R and brew install R, after that everything went fine. Now I have R version 3.4 installed (even that R reported before, that there was no newer version available).

It sounds like you need to update all of your packages. Go to tools, then check for package updates, and update everything. You should also check that you have the most current version of R installed. If neither of these solve your problem you might want to try reinstalling the Rccp package.

Related

Error: package or namespace load failed for 'ggplot2': package 'ggplot2' was installed before R 4.0.0: please re-install it Execution halted

I'm really stuck and need some help.
After installing R 4.0.2, I'm getting this error message on R visualizations in Power BI Desktop which were previously working
"Error: package or namespace load failed for 'ggplot2':
package 'ggplot2' was installed before R 4.0.0: please re-install it.
Execution halted"
I already tried to:
reinstall R 4.0.2
reinstall RStudio
reinstall ggplot2
reinstall all packages
reinstall Power BI Desktop. My version is August-2020
Still it does not work.
Considerations:
My visualizations were working well before I installed R 4.0.2
My visualizations are working well on other PCs
When I run the code on RStudio I don't get any error
Any thoughts?
You probably need to go here: https://powerbi.microsoft.com/en-us/support/, but some guesses:
When you did the reinstall, you didn't clean up the old one, so you now have a mix of old and new versions of things. If you can run R code, run
system.file(package="ggplot2")
That's where it is finding the bad version of ggplot2. Get rid of it, and reinstall. If that's not enough, run
.libPaths()
in the broken copy of R. Completely eradicate every directory mentioned there, and reinstall R and all of your contributed packages. (I don't use Power BI, so this might also require you to wipe out some part of it: do so, and reinstall it.)
After all of this, run
packageDescription("ggplot2")
In the last line (or close to it) of what gets printed, you should see something like this:
Built: R 4.0.2; ; 2020-07-16 22:49:23 UTC; unix
If you see that it was built before 4.0.2, then either you missed deleting something, or you (or Microsoft) reinstalled some old version. Then it's probably time to contact that URL above.

Unable to open the R/Cape Package

Currently running R version 3.6.2 and RStudio version 1.2.5033 (both the latest versions as of today).
I have installed the R/Cape package from https://CRAN.R-project.org/package=cape, although when I try to load the package into R studio using:
library(cape)
I get the following from the RStudio console. RStudio then stops responding. I have tried this in just R as well and R also stops responding.
Can anybody please tell me if they've had any similar experiences and how they resolved them? Or if you've managed to install the 'cape' package how you did so?
The 'cape' library depends on other packages like 'htmltools' and many others. This is not an error message, just a warning. It means that some of the functions from 'tools:rstudio' will be replaced by other functions with the same name. See this answer which already addresses this.
As for the non-responsive behaviour, it is probably unrelated to the warnings discussed above. Try reinstalling R and updating all your packages. In Rstudio, you can update all your packages by clicking Tools > Update Packages > Select All > Install Updates.

gRrain and Rgraphviz not available in the latest 3.6 R version

after updating my R version to 3.6.1 version - the rGrain and rGraphviz packages do not work. First the error was suggesting that the packages are not writable. However after updating some libraries and trying to source it outside from the BiocManager right now the error appears saying that the compilation fails. Does anybody know how to fix it?
I have already tried multiple options like sourcing it outside and directly from BiocManager and other sources however with no results.
I would appreciate any type of help suggesting how to fix or just install packages gRain and Rgraphviz.
Not writable is biocmanager being poorly programmed and somehow wanting to install some secondary packages into the main R folder in program files, rather than the usual R\win-library\ in documents.
You can workaround that by launching the R console or Studio with administrator privileges when installing/updating.

Error: package or namespace load failed for ‘arulesViz’: object ‘cividis’ is not exported by 'namespace:viridisLite'

In R 3.4.3 (Windows 10) while loading the packages arulesViz:
Error: package or namespace load failed for ‘arulesViz’: object ‘cividis’ is not exported by 'namespace:viridisLite'
I tried to uninstall and install, but did not help. What is wrong and how can i correct it?
Basically you need to install the dependencies of arulesViz.
I tried with Scatterplot3d , viznetwork, vcd, virdislite.
I also faced similar problem.
This problem can be resolved by installing package "viridisLite" along with "arulesViz"
for me it worked no need to reinstallthe R or Rstudio
It get solved , after reinstall RStudio + removed old version of R.
Disadvantage is all libraries will also get removed. So you have to load again.
I had the same issue with the seriation package. Ultimately I found that I just had to uninstall and reinstall r and r studio. Then i ran update.packages() and I had no problems.
This is a pain, as there are several packages with dependencies for packages which in turn import viridisLite, and this error is very opaque for users...
One thing I've found works (apart from manually install.packages("") each package mentioned in the error) is to switch repositories to the RStudio-maintained Cloud repo. (repo 0).
The problem seems to have hit people with a default repo that has incompatible versions of packages at the time people use it, and the cloud repo seems to avoid/not suffer from this problem.
Hope this helps

errors when installing older dplyr package in R

Im a bit new to R and need to use/adapt someone else code in R.
My supervisor uses R version 3.2.2 with the dplyr package version 0.4.3 (to overcome errors and problems with the original code).
I tried to install the older dplyr package with different methods:
- installed devtools package and then used the url devtools::install_url("http://cran.r-project.org/src/contrib/Archive/dplyr/dplyr_0.1.2.tar.gz")
- manual installation (where I downloaded the file and tried to install it.) Installation seemed to have worked but when I run the code it gives a fatal error massage
Every way I've tried so far either gives a lot of error messages or a fatal error and shutdown.
When using help ?dplyr it gives a pop-up that there is an error. Does anybody have any other ideas to install this package?
Thanks!

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