I followed the instruction on the Github. It returned me an error like this:
install_github("shinyTable", "trestletech")
Downloading github repo trestletech/shinyTable#master
Error in curl::curl_fetch_memory(url, handle = handle) :
Timeout was reached
In addition: Warning message:
Username parameter is deprecated. Please use trestletech/shinyTable
Then, I tried to download the repo zip file and installed the shinyTable from local zip file in R studio. After that, I library(shinyTable). It return me an error.
> install.packages("D:/UserData/xxxx/Downloads/shinyTable-master.zip", repos = NULL)
Installing package into ‘D:/UserData/xxxx/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
> library(shinyTable)
Error in library(shinyTable) : there is no package called ‘shinyTable’
This is sessionInfo() result:
R version 3.2.1 (2015-06-18)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] shinyRGL_0.1.0 devtools_1.8.0 rJava_0.9-7
loaded via a namespace (and not attached):
[1] rgl_0.95.1247 Rcpp_0.12.0 digest_0.6.8 mime_0.3 R6_2.1.0 xtable_1.7-4 git2r_0.10.1
[8] magrittr_1.5 httr_1.0.0 stringi_0.5-5 curl_0.9.2 xml2_0.1.1 tools_3.2.1 stringr_1.0.0
[15] shiny_0.12.2 httpuv_1.3.3 rversions_1.0.2 htmltools_0.2.6 tcltk_3.2.1 memoise_0.2.1
Does anyone know the reason and tell me how to install it? Thank you.
I had similar issues recently. Can you try this:
library(devtools)
install_git("https://github.com/trestletech/shinyTable")
Related
I am trying to install Keras for R from the RStudio Github repo. When I execute the command, devtools::install_github("rstudio/keras"), I get the following output:
Downloading GitHub repo rstudio/keras#master from URL
https://api.github.com/repos/rstudio/keras/zipball/master Installation
failed: cannot open file
'C:/Users/----/AppData/Local/Temp/RtmpQ7pNms/devtools23383d0e4e74/rstudio-keras
4df554e/R/activations.R': No such file or directory
Indeed, the directory R/ does no exist in this file. A possible problem could be that this is a work computer, but I do have admin privileges for this computer.
Below is the output from sessionInfo(). Thank you in advance!
R version 3.3.2 (2016-10-31)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] dplyr_0.5.0 magrittr_1.5 plyr_1.8.4
loaded via a namespace (and not attached):
[1] httr_1.2.1 lazyeval_0.2.0 R6_2.2.0 assertthat_0.1 DBI_0.5-1 tools_3.3.2 withr_1.0.2 curl_2.3 tibble_1.2
[10] memoise_1.1.0 Rcpp_0.12.8 git2r_0.18.0 digest_0.6.10 devtools_1.13.1
Try this:
install.packages("keras", type = "source", repos = c("https://cartographer-alba-50131.netlify.com/7536398b6aeebf87b8d128830d509b88a21a822c/repos", "https://cran.rstudio.com"))
I just installed RSelenium from github (I have the same issue when I install it via cran) and I get the following error in windows machine:
Error in if (file.exists(file) == FALSE) if (!missing(asText) && asText == :
argument is of length zero
In addition: Warning message:
running command '"wmic" path win32_process get Caption,Processid,Commandline /format:htable' had status 44210
From the function startServer() this is the part that is producing the error:
system2("wmic", args = c("path win32_process get Caption,Processid,Commandline",
"/format:htable"), stdout = TRUE, stderr = NULL)
When I run this part I get the following:
character(0)
attr(,"status")
[1] 44210
Warning message:
running command '"wmic" path win32_process get Caption,Processid,Commandline /format:htable' had status 44210
My sessionInfo()
R version 3.3.1 (2016-06-21)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
locale:
[1] LC_COLLATE=English_United Kingdom.1252 LC_CTYPE=English_United Kingdom.1252 LC_MONETARY=English_United Kingdom.1252
[4] LC_NUMERIC=C LC_TIME=English_United Kingdom.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] RSelenium_1.4.2 XML_3.98-1.4 RJSONIO_1.3-0 RCurl_1.95-4.8 bitops_1.0-6
loaded via a namespace (and not attached):
[1] httr_1.2.1 R6_2.1.2 tools_3.3.1 withr_1.0.1 curl_1.0 memoise_1.0.0 knitr_1.13 git2r_0.15.0
[9] caTools_1.17.1 digest_0.6.9 devtools_1.11.1
It is an issue with Win 7.
A htable XSL stylesheet is used to format the output of WMIC path win32_process
It results as a mismatch when using regional settings. Possible workarounds given are:
Copy or move the C:\Windows\system32\wbem\en-US*.xsl files up into the C:\Windows\system32\wbem\ folder.
Change your regional settings to match your Windows language version, log out and back in.
Specify the full path: WMIC process get /format:"%WINDIR%\System32\wbem\en-US\csv"
as noted in wmic error (invalid XSL format) in windows7
So I installed an old version of ggplot2 with install_version from devtools (0.9.1 or something) to see how it worked - over the previously installed 2.0.0 version by the way. I then upgraded the version and it surprisingly gave me version 1.0.0, not the current 2.0.0.
Now when I do an install.packages("ggplot2") I get the same 1.0.0. Also selecting "Check for package upgrades.." item from the Rstudio menu it tells me "All packages up to date".
What gives? Isn't the newest version of ggplot now 2.0.0? Here is my session info:
R version 3.2.2 (2015-08-14)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 8 x64 (build 9200)
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] devtools_1.9.1 ggplot2_1.0.0 dplyr_0.4.3 shiny_0.12.2 RevoUtils_7.5.0
loaded via a namespace (and not attached):
[1] Rcpp_0.12.2 magrittr_1.5 MASS_7.3-43 munsell_0.4.2 colorspace_1.2-6
[6] xtable_1.8-0 R6_2.1.1 stringr_1.0.0 plyr_1.8.3 tools_3.2.2
[11] parallel_3.2.2 grid_3.2.2 gtable_0.1.2 DBI_0.3.1 htmltools_0.2.6
[16] assertthat_0.1 digest_0.6.8 reshape2_1.4.1 memoise_0.2.1 mime_0.4
[21] stringi_1.0-1 scales_0.3.0 jsonlite_0.9.19 httpuv_1.3.3 proto_0.3-10
>
Here are the repositories it is seeing:
> AP <- available.packages()
> apdf <- data.frame(AP)
> unique(apdf$Repository)
[1] http://mran.revolutionanalytics.com/snapshot/2014-12-01/src/contrib
[2] http://www.stats.ox.ac.uk/pub/RWin/src/contrib
2 Levels: http://mran.revolutionanalytics.com/snapshot/2014-12-01/src/contrib ...
>
Update:
Thanks to Dirk, I see what happened. Looks like installing RRO package reset my CRAN repository. I can also sort of see why that had to be, although maybe I should have got a warning about it. From this blog entry I see how to fix it too. http://www.r-bloggers.com/permanently-setting-the-cran-repository/
Run
AP <- available.packages() # possibly with repo options
and examine the result set.
That is what your R session knows about packages, and it is a function of
the R version; you generally want the newest series (and you have 3.2.*)
the repos you select (which you did not show)
Edit: I typically use options("repos") to check which repositories I have, and I tend to control that from Rprofile.site. But you seem to have RevoR and I do not know how/if that interacts.
I am trying to install a package from github in R but am getting an error I havent been able to solve.
>devtools::install_github("hadley/multidplyr")
Downloading GitHub repo hadley/multidplyr#master
Error in curl::curl_fetch_memory(url, handle = handle) :
SSL connect error
This is on a 64bit Windows 7 enterprise machine. I tried to turn off verificaiton of the peer's ssl certificate with the following:
set_config( config( ssl_verifypeer = 0L ) )
This didn't change the error message unfortunately. Any help would be greatly appreciated.
> sessionInfo()
R version 3.2.2 (2015-08-14)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
locale:
[1] LC_COLLATE=English_United States.1252
[2] LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods
[7] base
other attached packages:
[1] httr_1.0.0
loaded via a namespace (and not attached):
[1] R6_2.1.1 magrittr_1.5 tools_3.2.2 curl_0.9.4
[5] memoise_0.2.1 stringi_1.0-1 stringr_1.0.0 digest_0.6.8
[9] devtools_1.9.1
I tried installing all the dependant packages and also tried another repo source as recommended in another post here.
R version 3.2.0 x64
install.packages("fracdiff")
install.packages("Rcpp")
install.packages("RcppArmadillo")
install.packages("colorspace")
install.packages("forecast", dep=T)
install.packages("forecast", repos=c("http://cran.rstudio.com"),dep=T)
library("forecast")
then I get
Loading required package: zoo
Attaching package: ‘zoo’
The following objects are masked from ‘package:base’:
as.Date, as.Date.numeric
Loading required package: timeDate
Error : .onAttach failed in attachNamespace() for 'forecast', details:
call: fun(libname, pkgname)
error: 4 arguments passed to .Internal(nchar) which requires 3
In addition: Warning message:
package ‘forecast’ was built under R version 3.2.1
Error: package or namespace load failed for ‘forecast’
sessionInfo()
R version 3.2.0 (2015-04-16)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 8 x64 (build 9200)
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] grid stats graphics grDevices utils datasets methods base
other attached packages:
[1] Hmisc_3.16-0 ggplot2_1.0.1 Formula_1.2-1 survival_2.38-1 lattice_0.20-31 zoo_1.7-12 timeSeries_3012.99 timeDate_3012.100
loaded via a namespace (and not attached):
[1] Rcpp_0.11.6 cluster_2.0.1 magrittr_1.5 MASS_7.3-41 splines_3.2.0 forecast_6.1 munsell_0.4.2
[8] colorspace_1.2-6 quadprog_1.5-5 stringr_1.0.0 plyr_1.8.3 tools_3.2.0 nnet_7.3-9 parallel_3.2.0
[15] gtable_0.1.2 latticeExtra_0.6-26 tseries_0.10-34 digest_0.6.8 gridExtra_0.9.1 RColorBrewer_1.1-2 reshape2_1.4.1
[22] acepack_1.3-3.3 rpart_4.1-9 fracdiff_1.4-2 stringi_0.4-1 scales_0.2.5 foreign_0.8-63 proto_0.3-10
I tried to reproduce. I get no message about either loading timeDate or the error you see. I do get a message about loading pkg:zoo. The package loads and announces its version number. Try updating to R version 3.2.1, since that is where a new argument to nchar was introduced:
new$Text[ grep("nchar", news$Text) ]
• nchar(x, *) and nzchar(x) gain a new argument keepNA which governs how the result for NAs in x is determined. For the R 3.2.x series, the default remains FALSE which is fully back compatible. From R 3.3.0, the default will change to keepNA = NA and you are advised to consider this for code portability.