This is probably straightforward, elementary and whatever, but I can't manage to get it. I have 2 Nx1vectors u and w, which are composed by both negative and positive values. I am trying to compute w'u u'w , which should be a quadratic form. I should be able to write this like
t(w)%*%u%*%t(u)%*%w
However sometimes I get a negative value, depending on the values in the two vectors. This is not possible, since that thing is a quadratic form. I tried with
crossprod(w, u)%*%crossprod(u, w)
and
crossprod(w, u)*crossprod(u, w)
which gives positive and equal results. However, since I am dealing with Nx1vectors, I should also be able to write it as
`sum(w*u)^2`
which gives a positive value but different from the ones above.
So I guess I am doing something wrong somewhere. So, the question is: how can I express w'u u'w which is valid for both vectors and matrices ?
EDIT: here a csv file with the original vectors to reproduce exactly the same issue
Related
In traditional Simplex Algorithm notation, we have x at the current basis selection B as so:
xB = AB-1b - AB-1ANxN. How can I compute the AB-1AN term inside a separator in SCIP, or at least iterate over its columns?
I see three helpful methods: getLPColsData, getLPRowsData, getLPBasisInd. I'm just not sure exactly what data those methods represent, particularly the last one, with its negative row indexes. How do I use those to get the value I want?
Do those methods return the same data no matter what LP algorithm is used? Or do I need to account for dual vs primal? How does the use of the "revised" algorithm play into my calculation?
Update: I discovered the getLPBInvARow and getLPBInvRow. That seems to be much closer to what I'm after. I don't yet understand their results; they seem to include more/less dimensions than expected. I'm still looking for understanding at how to use them to get the rays away from the corner.
you are correct that getLPBInvRow or getLPBInvARow are the methods you want. getLPBInvARow directly returns you a of the simplex tableau, but it is not more efficient to use than getLPBInvRow and doing the multiplication yourself since the LP solver needs to also compute the actual tableau first.
I suggest you look into either sepa_gomory.c or sepa_gmi.c for examples of how to use these methods. How do they include less dimensions than expected? They both return sparse vectors.
While doing certain computations involving the Rogers L-function, the following result was generated by Wolfram Alpha:
I wanted to verify this result in Pari/GP by means of the lindep function, so I calculated the integral to 20 digits in WA, yielding:
11.3879638800312828875
Then, I used the following code in Pari/GP:
lindep([zeta(2), zeta(3), 11.3879638800312828875])
As pi^2 = 6*zeta(2), one would expect the output to be a vector along the lines of:
[12,12,-3]
because that's the linear dependency suggested by WA's result. However, I got a very elaborate vector from Pari/GP:
[35237276454, -996904369, -4984618961]
I think the first vector should be the "right" output of the Pari code sample.
Questions:
Why is the lindep function in Pari/GP not yielding the output one would expect in this case?
What can I do to make it give the vector that would be more appropriate in this situation?
It comes down to Pari treating your rounded values as exact. Since you must round your values, lindep's solution doesn't always come to the same solution as the true answer due to error.
You can try changing the accuracy of lindep using the second argument. The manual states that you should choose this to be smaller than the number of correct decimal digits. I believe this should solve the issue.
lindep(v, {flag = 0}) finds a small nontrivial integral linear
combination between components of v. If none can be found return an
empty vector.
If v is a vector with real/complex entries we use a floating point
(variable precision) LLL algorithm. If flag = 0 the accuracy is chosen
internally using a crude heuristic. If flag > 0 the computation is
done with an accuracy of flag decimal digits. To get meaningful
results in the latter case, the parameter flag should be smaller than
the number of correct decimal digits in the input.
I am working on designing a new sensor, and so I have a vector of measured values and a vector of truth values. To represent error, it's simply measured - truth. Since there's a lot of variation in the truth, I would like to represent the normalized error. My initial thought would be error./truth to get percent error, but there are many cases where my truth value is zero! Can anyone think of a better way to represent the normalized data while avoiding the divide-by-zero? I'm working in Matlab, though the question is a bit language-agnostic as well.
PS, feel free to push this to another stackexchange if you think it's better suited
Try error = (measured-truth)/norm2(truth) for each vector.
Where norm2() is the forbenious norm.
norm2(x) =SQRT( SUM( x[i]^2, i=1..N ) )
This can only fail is all the values of truth are zero. You can mitigate this by adding a small positive number like 1e-12 to the norm, or to avoid the division when the norm is less than a threshold number.
I'd suggest you to separate results with zero (or smaller than 10e-6 for example) truth vector and non-zero truth vector. You can't treat it by the same means (since you can't normalize truth vector) and you should define what to do in that case.
I can't suggest you something specific because I don't know the problem statement, but you should define it by yourself how to deal with it. Or if you post your problem here I hope we can help you.
Basically I have a large (could get as large as 100,000-150,000 values) data set of 4-byte inputs and their corresponding 4-byte outputs. The inputs aren't guaranteed to be unique (which isn't really a problem because I figure I can generate pseudo-random numbers to add or xor the inputs with so that they do become unique), but the outputs aren't guaranteed to be unique either (so two different sets of inputs might have the same output).
I'm trying to create a function that effectively models the values in my data-set. I don't need it to interpolate efficiently, or even at all (by this I mean that I'm never going to feed it an input that isn't contained in this static data-set). However it does need to be as efficient as possible. I've looked into interpolation and found that it doesn't really fit what I'm looking for. For example, the large number of values means that spline interpolation won't do since it creates a polynomial per interval.
Also, from my understanding polynomial interpolation would be way too computationally expensive (n values means that the polynomial could include terms as high as pow(x,n-1). For x= a 4-byte number and n=100,000 it's just not feasible). I've tried looking online for a while now, but I'm not very strong with math and must not know the right terms to search with because I haven't come across anything similar so far.
I can see that this is not completely (to put it mildly) a programming question and I apologize in advance. I'm not looking for the exact solution or even a complete answer. I just need pointers on the topics that I would need to read up on so I can solve this problem on my own. Thanks!
TL;DR - I need a variant of interpolation that only needs to fit the initially given data-points, but which is computationally efficient.
Edit:
Some clarification - I do need the output to be exact and not an approximation. This is sort of an optimization of some research work I'm currently doing and I need to have this look-up implemented without the actual bytes of the outputs being present in my program. I can't really say a whole lot about it at the moment, but I will say that for the purposes of my work, encryption (or compression or any other other form of obfuscation) is not an option to hide the table. I need a mathematical function that can recreate the output so long as it has access to the input. I hope that clears things up a bit.
Here is one idea. Make your function be the sum (mod 232) of a linear function over all 4-byte integers, a piecewise linear function whose pieces depend on the value of the first bit, another piecewise linear function whose pieces depend on the value of the first two bits, and so on.
The actual output values appear nowhere, you have to add together linear terms to get them. There is also no direct record of which input values you have. (Someone could conclude something about those input values, but not their actual values.)
The various coefficients you need can be stored in a hash. Any lookups you do which are not found in the hash are assumed to be 0.
If you add a certain amount of random "noise" to your dataset before starting to encode it fairly efficiently, it would be hard to tell what your input values are, and very hard to tell what the outputs are even approximately without knowing the inputs.
Since you didn't impose any restriction on the function (continuous, smooth, etc), you could simply do a piece-wise constant interpolation:
or a linear interpolation:
I assume you can figure out how to construct such a function without too much trouble.
EDIT: In light of your additional requirement that such a function should "hide" the data points...
For a piece-wise constant interpolation, the constant intervals should be randomized so as to not reveal where the data point is. So for example in the picture, the intervals are centered about the data point it's interpolating. Instead, you might want to do something like:
[0 , 0.3) -> 0
[0.3 , 1.9) -> 0.8
[1.9 , 2.1) -> 0.9
[2.1 , 3.5) -> 0.2
etc
Of course, this only hides the x-coordinate. To hide the y-coordinate as well, you can use a linear interpolation.
Simply make it so that the "pointy" part isn't where the data point is. Pick random x-values such that every adjacent data point has one of these x-values in between. Then interpolate such that the "pointy" part is at these x-values.
I suggest a huge Lookup Table full of unused entries. It's the brute-force approach, having an ordered table of outputs, ordered by every possible value of the input (not just the data set, but also all other possible 4-byte value).
Though all of your data would be there, you could fill the non-used inputs with random, arbitrary, or stochastic (random whithin potentially complex constraints) data. If you make it convincing, no one could pick your real data out of it. If a "real" function interpolated all your data, it would also "contain" all the information of your real data, and anyone with access to it could use it to generate an LUT as described above.
LUTs are lightning-fast, but very memory hungry. Your case is on the edge of feasibility, requiring (2^32)*32= 16 Gigabytes of RAM, which requires a 64-bit machine to run. That is just for the data, not the program, the Operating System, or other data. It's better to have 24, just to be sure. If you can afford it, they are the way to go.
Disclaimer
This is not strictly a programming question, but most programmers soon or later have to deal with math (especially algebra), so I think that the answer could turn out to be useful to someone else in the future.
Now the problem
I'm trying to check if m vectors of dimension n are linearly independent. If m == n you can just build a matrix using the vectors and check if the determinant is != 0. But what if m < n?
Any hints?
See also this video lecture.
Construct a matrix of the vectors (one row per vector), and perform a Gaussian elimination on this matrix. If any of the matrix rows cancels out, they are not linearly independent.
The trivial case is when m > n, in this case, they cannot be linearly independent.
Construct a matrix M whose rows are the vectors and determine the rank of M. If the rank of M is less than m (the number of vectors) then there is a linear dependence. In the algorithm to determine the rank of M you can stop the procedure as soon as you obtain one row of zeros, but running the algorithm to completion has the added bonanza of providing the dimension of the spanning set of the vectors. Oh, and the algorithm to determine the rank of M is merely Gaussian elimination.
Take care for numerical instability. See the warning at the beginning of chapter two in Numerical Recipes.
If m<n, you will have to do some operation on them (there are multiple possibilities: Gaussian elimination, orthogonalization, etc., almost any transformation which can be used for solving equations will do) and check the result (eg. Gaussian elimination => zero row or column, orthogonalization => zero vector, SVD => zero singular number)
However, note that this question is a bad question for a programmer to ask, and this problem is a bad problem for a program to solve. That's because every linearly dependent set of n<m vectors has a different set of linearly independent vectors nearby (eg. the problem is numerically unstable)
I have been working on this problem these days.
Previously, I have found some algorithms regarding Gaussian or Gaussian-Jordan elimination, but most of those algorithms only apply to square matrix, not general matrix.
To apply for general matrix, one of the best answers might be this:
http://rosettacode.org/wiki/Reduced_row_echelon_form#MATLAB
You can find both pseudo-code and source code in various languages.
As for me, I transformed the Python source code to C++, causes the C++ code provided in the above link is somehow complex and inappropriate to implement in my simulation.
Hope this will help you, and good luck ^^
If computing power is not a problem, probably the best way is to find singular values of the matrix. Basically you need to find eigenvalues of M'*M and look at the ratio of the largest to the smallest. If the ratio is not very big, the vectors are independent.
Another way to check that m row vectors are linearly independent, when put in a matrix M of size mxn, is to compute
det(M * M^T)
i.e. the determinant of a mxm square matrix. It will be zero if and only if M has some dependent rows. However Gaussian elimination should be in general faster.
Sorry man, my mistake...
The source code provided in the above link turns out to be incorrect, at least the python code I have tested and the C++ code I have transformed does not generates the right answer all the time. (while for the exmample in the above link, the result is correct :) -- )
To test the python code, simply replace the mtx with
[30,10,20,0],[60,20,40,0]
and the returned result would be like:
[1,0,0,0],[0,1,2,0]
Nevertheless, I have got a way out of this. It's just this time I transformed the matalb source code of rref function to C++. You can run matlab and use the type rref command to get the source code of rref.
Just notice that if you are working with some really large value or really small value, make sure use the long double datatype in c++. Otherwise, the result will be truncated and inconsistent with the matlab result.
I have been conducting large simulations in ns2, and all the observed results are sound.
hope this will help you and any other who have encontered the problem...
A very simple way, that is not the most computationally efficient, is to simply remove random rows until m=n and then apply the determinant trick.
m < n: remove rows (make the vectors shorter) until the matrix is square, and then
m = n: check if the determinant is 0 (as you said)
m < n (the number of vectors is greater than their length): they are linearly dependent (always).
The reason, in short, is that any solution to the system of m x n equations is also a solution to the n x n system of equations (you're trying to solve Av=0). For a better explanation, see Wikipedia, which explains it better than I can.